Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
GPC4O75487 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
GPC4O75487 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC21.06■□□□□ 0.96
GPC4O75487 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC21.06■□□□□ 0.96
GPC4O75487 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
GPC4O75487 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
GPC4O75487 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
GPC4O75487 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
GPC4O75487 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
GPC4O75487 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
GPC4O75487 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC21.05■□□□□ 0.96
GPC4O75487 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC21.05■□□□□ 0.96
GPC4O75487 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
GPC4O75487 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
GPC4O75487 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
GPC4O75487 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
GPC4O75487 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC21.05■□□□□ 0.96
GPC4O75487 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
GPC4O75487 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
GPC4O75487 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
GPC4O75487 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
GPC4O75487 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
GPC4O75487 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
GPC4O75487 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC21.04■□□□□ 0.96
GPC4O75487 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
GPC4O75487 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
GPC4O75487 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC21.04■□□□□ 0.96
GPC4O75487 AC244015.2-201ENST00000616358 1861 ntBASIC21.04■□□□□ 0.96
GPC4O75487 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC21.04■□□□□ 0.96
GPC4O75487 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
GPC4O75487 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
GPC4O75487 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
GPC4O75487 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
GPC4O75487 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
GPC4O75487 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
GPC4O75487 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC21.03■□□□□ 0.96
GPC4O75487 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC21.03■□□□□ 0.96
GPC4O75487 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
GPC4O75487 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
GPC4O75487 JTB-203ENST00000368589 1216 ntTSL 2 BASIC21.03■□□□□ 0.96
GPC4O75487 NME4-202ENST00000382940 766 ntTSL 3 BASIC21.03■□□□□ 0.96
GPC4O75487 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
GPC4O75487 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC21.03■□□□□ 0.96
GPC4O75487 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC21.03■□□□□ 0.96
GPC4O75487 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
GPC4O75487 NME4-211ENST00000620944 1193 ntTSL 2 BASIC21.03■□□□□ 0.96
GPC4O75487 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
GPC4O75487 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
GPC4O75487 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
GPC4O75487 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
GPC4O75487 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
GPC4O75487 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
GPC4O75487 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
GPC4O75487 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
GPC4O75487 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC21.03■□□□□ 0.96
GPC4O75487 AC009237.3-201ENST00000393279 1427 ntBASIC21.03■□□□□ 0.96
GPC4O75487 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
GPC4O75487 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
GPC4O75487 GUK1-205ENST00000366722 850 ntTSL 3 BASIC21.02■□□□□ 0.96
GPC4O75487 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
GPC4O75487 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC21.02■□□□□ 0.96
GPC4O75487 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
GPC4O75487 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC21.02■□□□□ 0.96
GPC4O75487 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
GPC4O75487 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
GPC4O75487 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
GPC4O75487 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
GPC4O75487 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC21.01■□□□□ 0.95
GPC4O75487 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
GPC4O75487 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
GPC4O75487 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
GPC4O75487 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC21.01■□□□□ 0.95
GPC4O75487 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
GPC4O75487 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
GPC4O75487 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
GPC4O75487 AC027612.3-201ENST00000413684 1047 ntBASIC21.01■□□□□ 0.95
GPC4O75487 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC21.01■□□□□ 0.95
GPC4O75487 MIR6084-201ENST00000622012 110 ntBASIC21.01■□□□□ 0.95
GPC4O75487 AC026471.6-201ENST00000622954 1905 ntBASIC21.01■□□□□ 0.95
GPC4O75487 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
GPC4O75487 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
GPC4O75487 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
GPC4O75487 GOLGA2P6-201ENST00000340929 2049 ntBASIC21■□□□□ 0.95
GPC4O75487 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
GPC4O75487 AC005229.4-201ENST00000610085 2198 ntBASIC21■□□□□ 0.95
GPC4O75487 PXK-203ENST00000383715 1756 ntTSL 5 BASIC21■□□□□ 0.95
GPC4O75487 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
GPC4O75487 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC21■□□□□ 0.95
GPC4O75487 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
GPC4O75487 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC21■□□□□ 0.95
GPC4O75487 AK1-201ENST00000223836 736 ntTSL 3 BASIC21■□□□□ 0.95
GPC4O75487 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
GPC4O75487 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
GPC4O75487 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
GPC4O75487 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
GPC4O75487 NT5C3AP1-201ENST00000394500 1012 ntBASIC21■□□□□ 0.95
GPC4O75487 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC21■□□□□ 0.95
GPC4O75487 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC21■□□□□ 0.95
GPC4O75487 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
GPC4O75487 TPRG1LP1-201ENST00000598702 760 ntBASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms