Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC20.69■□□□□ 0.9
CDC7O00311 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CDC7O00311 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC20.69■□□□□ 0.9
CDC7O00311 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC20.69■□□□□ 0.9
CDC7O00311 MIR6084-201ENST00000622012 110 ntBASIC20.69■□□□□ 0.9
CDC7O00311 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDC7O00311 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDC7O00311 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC20.69■□□□□ 0.9
CDC7O00311 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC20.69■□□□□ 0.9
CDC7O00311 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CDC7O00311 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.68■□□□□ 0.9
CDC7O00311 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.68■□□□□ 0.9
CDC7O00311 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.68■□□□□ 0.9
CDC7O00311 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDC7O00311 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDC7O00311 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDC7O00311 MIR638-201ENST00000385237 100 ntBASIC20.68■□□□□ 0.9
CDC7O00311 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC20.68■□□□□ 0.9
CDC7O00311 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC20.68■□□□□ 0.9
CDC7O00311 AL354811.1-201ENST00000610286 706 ntBASIC20.68■□□□□ 0.9
CDC7O00311 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.68■□□□□ 0.9
CDC7O00311 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDC7O00311 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
CDC7O00311 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDC7O00311 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.68■□□□□ 0.9
CDC7O00311 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.68■□□□□ 0.9
CDC7O00311 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CDC7O00311 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDC7O00311 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20.68■□□□□ 0.9
CDC7O00311 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.68■□□□□ 0.9
CDC7O00311 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
CDC7O00311 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDC7O00311 AL049796.1-201ENST00000565336 1766 ntBASIC20.67■□□□□ 0.9
CDC7O00311 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDC7O00311 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDC7O00311 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.67■□□□□ 0.9
CDC7O00311 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDC7O00311 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDC7O00311 NT5C3AP1-201ENST00000394500 1012 ntBASIC20.67■□□□□ 0.9
CDC7O00311 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC20.67■□□□□ 0.9
CDC7O00311 AC105265.2-201ENST00000467189 838 ntBASIC20.67■□□□□ 0.9
CDC7O00311 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDC7O00311 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.67■□□□□ 0.9
CDC7O00311 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDC7O00311 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC20.67■□□□□ 0.9
CDC7O00311 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDC7O00311 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.67■□□□□ 0.9
CDC7O00311 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.67■□□□□ 0.9
CDC7O00311 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDC7O00311 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDC7O00311 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CDC7O00311 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CDC7O00311 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC20.66■□□□□ 0.9
CDC7O00311 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDC7O00311 FXN-202ENST00000396364 980 ntTSL 5 BASIC20.66■□□□□ 0.9
CDC7O00311 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC20.66■□□□□ 0.9
CDC7O00311 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC20.66■□□□□ 0.9
CDC7O00311 TPRG1LP1-201ENST00000598702 760 ntBASIC20.66■□□□□ 0.9
CDC7O00311 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CDC7O00311 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC20.66■□□□□ 0.9
CDC7O00311 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDC7O00311 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CDC7O00311 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDC7O00311 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CDC7O00311 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.66■□□□□ 0.9
CDC7O00311 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDC7O00311 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDC7O00311 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
CDC7O00311 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.66■□□□□ 0.9
CDC7O00311 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
CDC7O00311 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDC7O00311 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
CDC7O00311 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
CDC7O00311 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CDC7O00311 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CDC7O00311 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.65■□□□□ 0.9
CDC7O00311 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC20.65■□□□□ 0.9
CDC7O00311 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
CDC7O00311 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CDC7O00311 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDC7O00311 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDC7O00311 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CDC7O00311 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CDC7O00311 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CDC7O00311 NME4-202ENST00000382940 766 ntTSL 3 BASIC20.64■□□□□ 0.89
CDC7O00311 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CDC7O00311 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CDC7O00311 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CDC7O00311 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC20.64■□□□□ 0.89
CDC7O00311 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC20.64■□□□□ 0.89
CDC7O00311 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC20.64■□□□□ 0.89
CDC7O00311 NME4-211ENST00000620944 1193 ntTSL 2 BASIC20.64■□□□□ 0.89
CDC7O00311 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC20.64■□□□□ 0.89
CDC7O00311 AL358852.1-201ENST00000623174 1268 ntBASIC20.64■□□□□ 0.89
CDC7O00311 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
CDC7O00311 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CDC7O00311 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CDC7O00311 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
CDC7O00311 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CDC7O00311 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms