Protein–RNA interactions for Protein: E7ERA6

RNF223, RING finger protein 223, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF223E7ERA6 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC17.54■□□□□ 0.4
RNF223E7ERA6 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC17.54■□□□□ 0.4
RNF223E7ERA6 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC17.53■□□□□ 0.4
RNF223E7ERA6 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF223E7ERA6 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RNF223E7ERA6 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RNF223E7ERA6 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF223E7ERA6 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC17.53■□□□□ 0.4
RNF223E7ERA6 PEX7-202ENST00000367756 680 ntTSL 3 BASIC17.53■□□□□ 0.4
RNF223E7ERA6 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
RNF223E7ERA6 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC17.53■□□□□ 0.4
RNF223E7ERA6 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC17.53■□□□□ 0.4
RNF223E7ERA6 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC17.53■□□□□ 0.4
RNF223E7ERA6 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC17.53■□□□□ 0.4
RNF223E7ERA6 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF223E7ERA6 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF223E7ERA6 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF223E7ERA6 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RNF223E7ERA6 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF223E7ERA6 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC17.53■□□□□ 0.4
RNF223E7ERA6 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RNF223E7ERA6 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
RNF223E7ERA6 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
RNF223E7ERA6 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC17.52■□□□□ 0.4
RNF223E7ERA6 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC17.52■□□□□ 0.4
RNF223E7ERA6 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
RNF223E7ERA6 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RNF223E7ERA6 ATP5C1-201ENST00000335698 1078 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
RNF223E7ERA6 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RNF223E7ERA6 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC17.52■□□□□ 0.4
RNF223E7ERA6 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
RNF223E7ERA6 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC17.52■□□□□ 0.4
RNF223E7ERA6 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC17.52■□□□□ 0.4
RNF223E7ERA6 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RNF223E7ERA6 AL589935.2-201ENST00000616471 1231 ntBASIC17.52■□□□□ 0.4
RNF223E7ERA6 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC17.52■□□□□ 0.4
RNF223E7ERA6 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RNF223E7ERA6 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC17.52■□□□□ 0.4
RNF223E7ERA6 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC17.52■□□□□ 0.39
RNF223E7ERA6 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
RNF223E7ERA6 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
RNF223E7ERA6 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC17.52■□□□□ 0.39
RNF223E7ERA6 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RNF223E7ERA6 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
RNF223E7ERA6 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RNF223E7ERA6 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
RNF223E7ERA6 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RNF223E7ERA6 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RNF223E7ERA6 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
RNF223E7ERA6 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RNF223E7ERA6 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
RNF223E7ERA6 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RNF223E7ERA6 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
RNF223E7ERA6 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC17.51■□□□□ 0.39
RNF223E7ERA6 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC17.51■□□□□ 0.39
RNF223E7ERA6 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC17.51■□□□□ 0.39
RNF223E7ERA6 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC17.51■□□□□ 0.39
RNF223E7ERA6 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RNF223E7ERA6 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC17.51■□□□□ 0.39
RNF223E7ERA6 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC17.51■□□□□ 0.39
RNF223E7ERA6 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RNF223E7ERA6 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
RNF223E7ERA6 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
RNF223E7ERA6 AC061975.6-201ENST00000579045 1553 ntBASIC17.51■□□□□ 0.39
RNF223E7ERA6 USP36-216ENST00000589424 970 ntTSL 5 BASIC17.51■□□□□ 0.39
RNF223E7ERA6 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC17.51■□□□□ 0.39
RNF223E7ERA6 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RNF223E7ERA6 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC17.51■□□□□ 0.39
RNF223E7ERA6 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
RNF223E7ERA6 RARG-204ENST00000543726 1779 ntTSL 2 BASIC17.51■□□□□ 0.39
RNF223E7ERA6 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RNF223E7ERA6 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RNF223E7ERA6 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RNF223E7ERA6 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RNF223E7ERA6 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RNF223E7ERA6 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RNF223E7ERA6 IFNA4-201ENST00000421715 978 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
RNF223E7ERA6 STK33P1-201ENST00000423835 1218 ntBASIC17.5■□□□□ 0.39
RNF223E7ERA6 GATS-209ENST00000454084 1030 ntTSL 3 BASIC17.5■□□□□ 0.39
RNF223E7ERA6 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC17.5■□□□□ 0.39
RNF223E7ERA6 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC17.5■□□□□ 0.39
RNF223E7ERA6 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC17.5■□□□□ 0.39
RNF223E7ERA6 AC243732.1-201ENST00000612648 864 ntBASIC17.5■□□□□ 0.39
RNF223E7ERA6 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
RNF223E7ERA6 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RNF223E7ERA6 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
RNF223E7ERA6 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RNF223E7ERA6 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RNF223E7ERA6 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC17.49■□□□□ 0.39
RNF223E7ERA6 AC008550.1-201ENST00000511500 884 ntBASIC17.49■□□□□ 0.39
RNF223E7ERA6 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC17.49■□□□□ 0.39
RNF223E7ERA6 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RNF223E7ERA6 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RNF223E7ERA6 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
RNF223E7ERA6 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RNF223E7ERA6 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC17.49■□□□□ 0.39
RNF223E7ERA6 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
RNF223E7ERA6 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RNF223E7ERA6 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC17.49■□□□□ 0.39
RNF223E7ERA6 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms