Protein–RNA interactions for Protein: B2RNG4

TRIM6-TRIM34, TRIM6-TRIM34 readthrough, humanhuman

Predictions only

Length 842 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-TRIM34B2RNG4 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC25.77■■□□□ 1.72
TRIM6-TRIM34B2RNG4 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
TRIM6-TRIM34B2RNG4 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC25.77■■□□□ 1.72
TRIM6-TRIM34B2RNG4 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.72
TRIM6-TRIM34B2RNG4 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC25.76■■□□□ 1.72
TRIM6-TRIM34B2RNG4 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
TRIM6-TRIM34B2RNG4 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
TRIM6-TRIM34B2RNG4 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC25.76■■□□□ 1.71
TRIM6-TRIM34B2RNG4 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
TRIM6-TRIM34B2RNG4 LGR4-203ENST00000480977 492 ntTSL 2 BASIC25.76■■□□□ 1.71
TRIM6-TRIM34B2RNG4 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC25.76■■□□□ 1.71
TRIM6-TRIM34B2RNG4 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC25.76■■□□□ 1.71
TRIM6-TRIM34B2RNG4 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC25.76■■□□□ 1.71
TRIM6-TRIM34B2RNG4 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC25.76■■□□□ 1.71
TRIM6-TRIM34B2RNG4 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC25.76■■□□□ 1.71
TRIM6-TRIM34B2RNG4 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC25.76■■□□□ 1.71
TRIM6-TRIM34B2RNG4 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC25.76■■□□□ 1.71
TRIM6-TRIM34B2RNG4 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
TRIM6-TRIM34B2RNG4 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC25.76■■□□□ 1.71
TRIM6-TRIM34B2RNG4 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC25.76■■□□□ 1.71
TRIM6-TRIM34B2RNG4 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC25.76■■□□□ 1.71
TRIM6-TRIM34B2RNG4 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
TRIM6-TRIM34B2RNG4 AL024507.2-201ENST00000606070 2574 ntBASIC25.76■■□□□ 1.71
TRIM6-TRIM34B2RNG4 USP48-205ENST00000421625 2818 ntTSL 2 BASIC25.75■■□□□ 1.71
TRIM6-TRIM34B2RNG4 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC25.75■■□□□ 1.71
TRIM6-TRIM34B2RNG4 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC25.75■■□□□ 1.71
TRIM6-TRIM34B2RNG4 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC25.75■■□□□ 1.71
TRIM6-TRIM34B2RNG4 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
TRIM6-TRIM34B2RNG4 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC25.75■■□□□ 1.71
TRIM6-TRIM34B2RNG4 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
TRIM6-TRIM34B2RNG4 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
TRIM6-TRIM34B2RNG4 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC25.75■■□□□ 1.71
TRIM6-TRIM34B2RNG4 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC25.75■■□□□ 1.71
TRIM6-TRIM34B2RNG4 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
TRIM6-TRIM34B2RNG4 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
TRIM6-TRIM34B2RNG4 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
TRIM6-TRIM34B2RNG4 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
TRIM6-TRIM34B2RNG4 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC25.74■■□□□ 1.71
TRIM6-TRIM34B2RNG4 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC25.74■■□□□ 1.71
TRIM6-TRIM34B2RNG4 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
TRIM6-TRIM34B2RNG4 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC25.74■■□□□ 1.71
TRIM6-TRIM34B2RNG4 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC25.74■■□□□ 1.71
TRIM6-TRIM34B2RNG4 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
TRIM6-TRIM34B2RNG4 SP2-202ENST00000613139 908 ntTSL 5 BASIC25.74■■□□□ 1.71
TRIM6-TRIM34B2RNG4 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC25.74■■□□□ 1.71
TRIM6-TRIM34B2RNG4 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC25.74■■□□□ 1.71
TRIM6-TRIM34B2RNG4 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
TRIM6-TRIM34B2RNG4 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC25.73■■□□□ 1.71
TRIM6-TRIM34B2RNG4 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC25.73■■□□□ 1.71
TRIM6-TRIM34B2RNG4 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
TRIM6-TRIM34B2RNG4 CPT2-209ENST00000636935 803 ntTSL 5 BASIC25.73■■□□□ 1.71
TRIM6-TRIM34B2RNG4 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
TRIM6-TRIM34B2RNG4 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC25.73■■□□□ 1.71
TRIM6-TRIM34B2RNG4 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
TRIM6-TRIM34B2RNG4 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
TRIM6-TRIM34B2RNG4 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC25.73■■□□□ 1.71
TRIM6-TRIM34B2RNG4 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC25.73■■□□□ 1.71
TRIM6-TRIM34B2RNG4 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
TRIM6-TRIM34B2RNG4 MFF-207ENST00000409565 1548 ntTSL 2 BASIC25.73■■□□□ 1.71
TRIM6-TRIM34B2RNG4 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
TRIM6-TRIM34B2RNG4 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC25.72■■□□□ 1.71
TRIM6-TRIM34B2RNG4 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC25.72■■□□□ 1.71
TRIM6-TRIM34B2RNG4 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC25.72■■□□□ 1.71
TRIM6-TRIM34B2RNG4 NARF-205ENST00000412079 1760 ntTSL 5 BASIC25.72■■□□□ 1.71
TRIM6-TRIM34B2RNG4 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
TRIM6-TRIM34B2RNG4 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
TRIM6-TRIM34B2RNG4 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC25.72■■□□□ 1.71
TRIM6-TRIM34B2RNG4 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC25.72■■□□□ 1.71
TRIM6-TRIM34B2RNG4 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC25.72■■□□□ 1.71
TRIM6-TRIM34B2RNG4 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC25.72■■□□□ 1.71
TRIM6-TRIM34B2RNG4 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC25.72■■□□□ 1.71
TRIM6-TRIM34B2RNG4 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC25.72■■□□□ 1.71
TRIM6-TRIM34B2RNG4 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
TRIM6-TRIM34B2RNG4 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
TRIM6-TRIM34B2RNG4 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC25.72■■□□□ 1.71
TRIM6-TRIM34B2RNG4 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC25.72■■□□□ 1.71
TRIM6-TRIM34B2RNG4 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
TRIM6-TRIM34B2RNG4 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC25.72■■□□□ 1.71
TRIM6-TRIM34B2RNG4 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC25.71■■□□□ 1.71
TRIM6-TRIM34B2RNG4 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
TRIM6-TRIM34B2RNG4 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
TRIM6-TRIM34B2RNG4 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC25.71■■□□□ 1.71
TRIM6-TRIM34B2RNG4 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
TRIM6-TRIM34B2RNG4 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC25.71■■□□□ 1.71
TRIM6-TRIM34B2RNG4 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
TRIM6-TRIM34B2RNG4 AC079140.4-201ENST00000507448 529 ntBASIC25.71■■□□□ 1.71
TRIM6-TRIM34B2RNG4 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
TRIM6-TRIM34B2RNG4 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC25.71■■□□□ 1.71
TRIM6-TRIM34B2RNG4 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
TRIM6-TRIM34B2RNG4 RARG-204ENST00000543726 1779 ntTSL 2 BASIC25.71■■□□□ 1.71
TRIM6-TRIM34B2RNG4 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
TRIM6-TRIM34B2RNG4 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC25.7■■□□□ 1.71
TRIM6-TRIM34B2RNG4 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC25.7■■□□□ 1.71
TRIM6-TRIM34B2RNG4 LINC02228-203ENST00000641970 1355 ntBASIC25.7■■□□□ 1.71
TRIM6-TRIM34B2RNG4 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC25.7■■□□□ 1.7
TRIM6-TRIM34B2RNG4 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
TRIM6-TRIM34B2RNG4 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC25.7■■□□□ 1.7
TRIM6-TRIM34B2RNG4 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
TRIM6-TRIM34B2RNG4 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC25.7■■□□□ 1.7
TRIM6-TRIM34B2RNG4 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms