Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 PALM-207ENST00000590161 2137 ntTSL 4 BASIC16.98■□□□□ 0.31
SRRM4A7MD48 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
SRRM4A7MD48 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SRRM4A7MD48 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SRRM4A7MD48 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC16.98■□□□□ 0.31
SRRM4A7MD48 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
SRRM4A7MD48 NARF-205ENST00000412079 1760 ntTSL 5 BASIC16.97■□□□□ 0.31
SRRM4A7MD48 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC16.97■□□□□ 0.31
SRRM4A7MD48 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
SRRM4A7MD48 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
SRRM4A7MD48 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SRRM4A7MD48 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SRRM4A7MD48 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
SRRM4A7MD48 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC16.97■□□□□ 0.31
SRRM4A7MD48 MFF-208ENST00000409616 1247 ntTSL 5 BASIC16.97■□□□□ 0.31
SRRM4A7MD48 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC16.97■□□□□ 0.31
SRRM4A7MD48 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
SRRM4A7MD48 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SRRM4A7MD48 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SRRM4A7MD48 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC16.97■□□□□ 0.31
SRRM4A7MD48 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SRRM4A7MD48 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
SRRM4A7MD48 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
SRRM4A7MD48 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
SRRM4A7MD48 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
SRRM4A7MD48 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
SRRM4A7MD48 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SRRM4A7MD48 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
SRRM4A7MD48 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SRRM4A7MD48 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SRRM4A7MD48 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC16.96■□□□□ 0.31
SRRM4A7MD48 RALB-208ENST00000631312 311 ntTSL 5 BASIC16.96■□□□□ 0.31
SRRM4A7MD48 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SRRM4A7MD48 PARN-205ENST00000539279 1557 ntTSL 2 BASIC16.96■□□□□ 0.31
SRRM4A7MD48 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SRRM4A7MD48 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SRRM4A7MD48 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC16.96■□□□□ 0.31
SRRM4A7MD48 AL049796.1-201ENST00000565336 1766 ntBASIC16.96■□□□□ 0.31
SRRM4A7MD48 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
SRRM4A7MD48 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SRRM4A7MD48 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC16.96■□□□□ 0.31
SRRM4A7MD48 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
SRRM4A7MD48 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
SRRM4A7MD48 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
SRRM4A7MD48 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC16.95■□□□□ 0.3
SRRM4A7MD48 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
SRRM4A7MD48 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SRRM4A7MD48 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SRRM4A7MD48 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SRRM4A7MD48 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SRRM4A7MD48 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SRRM4A7MD48 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SRRM4A7MD48 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
SRRM4A7MD48 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SRRM4A7MD48 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SRRM4A7MD48 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC16.95■□□□□ 0.3
SRRM4A7MD48 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC16.95■□□□□ 0.3
SRRM4A7MD48 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SRRM4A7MD48 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SRRM4A7MD48 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SRRM4A7MD48 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SRRM4A7MD48 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SRRM4A7MD48 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC16.94■□□□□ 0.3
SRRM4A7MD48 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SRRM4A7MD48 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
SRRM4A7MD48 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC16.94■□□□□ 0.3
SRRM4A7MD48 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC16.94■□□□□ 0.3
SRRM4A7MD48 AC012414.1-201ENST00000556676 535 ntBASIC16.94■□□□□ 0.3
SRRM4A7MD48 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SRRM4A7MD48 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SRRM4A7MD48 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC16.94■□□□□ 0.3
SRRM4A7MD48 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
SRRM4A7MD48 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SRRM4A7MD48 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC16.94■□□□□ 0.3
SRRM4A7MD48 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC16.94■□□□□ 0.3
SRRM4A7MD48 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC16.94■□□□□ 0.3
SRRM4A7MD48 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC16.94■□□□□ 0.3
SRRM4A7MD48 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SRRM4A7MD48 STX5-203ENST00000394690 1568 ntTSL 5 BASIC16.94■□□□□ 0.3
SRRM4A7MD48 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
SRRM4A7MD48 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC16.93■□□□□ 0.3
SRRM4A7MD48 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC16.93■□□□□ 0.3
SRRM4A7MD48 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SRRM4A7MD48 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC16.93■□□□□ 0.3
SRRM4A7MD48 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SRRM4A7MD48 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SRRM4A7MD48 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC16.93■□□□□ 0.3
SRRM4A7MD48 AC142381.2-201ENST00000566120 298 ntBASIC16.93■□□□□ 0.3
SRRM4A7MD48 AC005837.3-201ENST00000612163 286 ntBASIC16.93■□□□□ 0.3
SRRM4A7MD48 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC16.93■□□□□ 0.3
SRRM4A7MD48 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC16.93■□□□□ 0.3
SRRM4A7MD48 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
SRRM4A7MD48 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
SRRM4A7MD48 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC16.93■□□□□ 0.3
SRRM4A7MD48 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SRRM4A7MD48 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SRRM4A7MD48 MPST-204ENST00000404393 1329 ntTSL 5 BASIC16.93■□□□□ 0.3
SRRM4A7MD48 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
SRRM4A7MD48 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
SRRM4A7MD48 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms