Protein–RNA interactions for Protein: A6NLX3

SPDYE4, Speedy protein E4, humanhuman

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE4A6NLX3 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
SPDYE4A6NLX3 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
SPDYE4A6NLX3 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC23.54■■□□□ 1.36
SPDYE4A6NLX3 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
SPDYE4A6NLX3 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC23.54■■□□□ 1.36
SPDYE4A6NLX3 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC23.54■■□□□ 1.36
SPDYE4A6NLX3 LHPP-203ENST00000392757 840 ntTSL 3 BASIC23.54■■□□□ 1.36
SPDYE4A6NLX3 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC23.54■■□□□ 1.36
SPDYE4A6NLX3 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
SPDYE4A6NLX3 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
SPDYE4A6NLX3 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
SPDYE4A6NLX3 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC23.54■■□□□ 1.36
SPDYE4A6NLX3 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
SPDYE4A6NLX3 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
SPDYE4A6NLX3 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC23.53■■□□□ 1.36
SPDYE4A6NLX3 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC23.53■■□□□ 1.36
SPDYE4A6NLX3 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
SPDYE4A6NLX3 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
SPDYE4A6NLX3 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
SPDYE4A6NLX3 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC23.53■■□□□ 1.36
SPDYE4A6NLX3 NT5C3AP1-201ENST00000394500 1012 ntBASIC23.53■■□□□ 1.36
SPDYE4A6NLX3 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
SPDYE4A6NLX3 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC23.53■■□□□ 1.36
SPDYE4A6NLX3 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC23.53■■□□□ 1.36
SPDYE4A6NLX3 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC23.53■■□□□ 1.36
SPDYE4A6NLX3 ESRRAP2-201ENST00000418437 1549 ntBASIC23.53■■□□□ 1.36
SPDYE4A6NLX3 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC23.53■■□□□ 1.36
SPDYE4A6NLX3 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC23.53■■□□□ 1.36
SPDYE4A6NLX3 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
SPDYE4A6NLX3 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC23.52■■□□□ 1.36
SPDYE4A6NLX3 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC23.52■■□□□ 1.36
SPDYE4A6NLX3 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC23.52■■□□□ 1.36
SPDYE4A6NLX3 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
SPDYE4A6NLX3 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC23.52■■□□□ 1.36
SPDYE4A6NLX3 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC23.52■■□□□ 1.36
SPDYE4A6NLX3 OR2I1P-207ENST00000453522 948 ntBASIC23.52■■□□□ 1.36
SPDYE4A6NLX3 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
SPDYE4A6NLX3 AL499627.2-201ENST00000606283 725 ntBASIC23.52■■□□□ 1.36
SPDYE4A6NLX3 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
SPDYE4A6NLX3 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC23.52■■□□□ 1.36
SPDYE4A6NLX3 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC23.52■■□□□ 1.36
SPDYE4A6NLX3 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.35
SPDYE4A6NLX3 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
SPDYE4A6NLX3 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC23.51■■□□□ 1.35
SPDYE4A6NLX3 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC23.51■■□□□ 1.35
SPDYE4A6NLX3 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
SPDYE4A6NLX3 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC23.51■■□□□ 1.35
SPDYE4A6NLX3 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC23.51■■□□□ 1.35
SPDYE4A6NLX3 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
SPDYE4A6NLX3 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
SPDYE4A6NLX3 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC23.51■■□□□ 1.35
SPDYE4A6NLX3 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC23.51■■□□□ 1.35
SPDYE4A6NLX3 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
SPDYE4A6NLX3 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
SPDYE4A6NLX3 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC23.51■■□□□ 1.35
SPDYE4A6NLX3 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC23.51■■□□□ 1.35
SPDYE4A6NLX3 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC23.51■■□□□ 1.35
SPDYE4A6NLX3 MTATP6P19-201ENST00000413797 659 ntBASIC23.51■■□□□ 1.35
SPDYE4A6NLX3 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC23.51■■□□□ 1.35
SPDYE4A6NLX3 AC105233.4-201ENST00000642045 216 ntBASIC23.51■■□□□ 1.35
SPDYE4A6NLX3 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC23.51■■□□□ 1.35
SPDYE4A6NLX3 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
SPDYE4A6NLX3 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
SPDYE4A6NLX3 MPST-204ENST00000404393 1329 ntTSL 5 BASIC23.51■■□□□ 1.35
SPDYE4A6NLX3 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
SPDYE4A6NLX3 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC23.51■■□□□ 1.35
SPDYE4A6NLX3 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
SPDYE4A6NLX3 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
SPDYE4A6NLX3 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
SPDYE4A6NLX3 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC23.5■■□□□ 1.35
SPDYE4A6NLX3 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
SPDYE4A6NLX3 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC23.5■■□□□ 1.35
SPDYE4A6NLX3 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
SPDYE4A6NLX3 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
SPDYE4A6NLX3 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
SPDYE4A6NLX3 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
SPDYE4A6NLX3 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC23.5■■□□□ 1.35
SPDYE4A6NLX3 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC23.5■■□□□ 1.35
SPDYE4A6NLX3 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC23.5■■□□□ 1.35
SPDYE4A6NLX3 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC23.5■■□□□ 1.35
SPDYE4A6NLX3 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
SPDYE4A6NLX3 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
SPDYE4A6NLX3 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
SPDYE4A6NLX3 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
SPDYE4A6NLX3 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
SPDYE4A6NLX3 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC23.49■■□□□ 1.35
SPDYE4A6NLX3 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
SPDYE4A6NLX3 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
SPDYE4A6NLX3 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
SPDYE4A6NLX3 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
SPDYE4A6NLX3 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC23.49■■□□□ 1.35
SPDYE4A6NLX3 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC23.49■■□□□ 1.35
SPDYE4A6NLX3 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC23.49■■□□□ 1.35
SPDYE4A6NLX3 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC23.49■■□□□ 1.35
SPDYE4A6NLX3 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
SPDYE4A6NLX3 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC23.49■■□□□ 1.35
SPDYE4A6NLX3 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
SPDYE4A6NLX3 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
SPDYE4A6NLX3 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
SPDYE4A6NLX3 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC23.49■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms