Protein–RNA interactions for Protein: A0A0J9YWV2

TRBV4-1, T-cell receptor beta variable 4-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV4-1A0A0J9YWV2 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRBV4-1A0A0J9YWV2 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
TRBV4-1A0A0J9YWV2 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
TRBV4-1A0A0J9YWV2 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC19.32■□□□□ 0.68
TRBV4-1A0A0J9YWV2 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC19.32■□□□□ 0.68
TRBV4-1A0A0J9YWV2 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC19.32■□□□□ 0.68
TRBV4-1A0A0J9YWV2 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
TRBV4-1A0A0J9YWV2 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRBV4-1A0A0J9YWV2 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC19.32■□□□□ 0.68
TRBV4-1A0A0J9YWV2 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TRBV4-1A0A0J9YWV2 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
TRBV4-1A0A0J9YWV2 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TRBV4-1A0A0J9YWV2 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TRBV4-1A0A0J9YWV2 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
TRBV4-1A0A0J9YWV2 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
TRBV4-1A0A0J9YWV2 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
TRBV4-1A0A0J9YWV2 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
TRBV4-1A0A0J9YWV2 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TRBV4-1A0A0J9YWV2 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.31■□□□□ 0.68
TRBV4-1A0A0J9YWV2 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TRBV4-1A0A0J9YWV2 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
TRBV4-1A0A0J9YWV2 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TRBV4-1A0A0J9YWV2 SNX3-202ENST00000349379 890 ntTSL 2 BASIC19.31■□□□□ 0.68
TRBV4-1A0A0J9YWV2 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TRBV4-1A0A0J9YWV2 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC19.31■□□□□ 0.68
TRBV4-1A0A0J9YWV2 AL356441.2-201ENST00000443009 864 ntBASIC19.31■□□□□ 0.68
TRBV4-1A0A0J9YWV2 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC19.31■□□□□ 0.68
TRBV4-1A0A0J9YWV2 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC19.31■□□□□ 0.68
TRBV4-1A0A0J9YWV2 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
TRBV4-1A0A0J9YWV2 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TRBV4-1A0A0J9YWV2 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19.31■□□□□ 0.68
TRBV4-1A0A0J9YWV2 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRBV4-1A0A0J9YWV2 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC19.31■□□□□ 0.68
TRBV4-1A0A0J9YWV2 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRBV4-1A0A0J9YWV2 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC19.31■□□□□ 0.68
TRBV4-1A0A0J9YWV2 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRBV4-1A0A0J9YWV2 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TRBV4-1A0A0J9YWV2 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRBV4-1A0A0J9YWV2 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.3■□□□□ 0.68
TRBV4-1A0A0J9YWV2 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRBV4-1A0A0J9YWV2 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TRBV4-1A0A0J9YWV2 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TRBV4-1A0A0J9YWV2 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
TRBV4-1A0A0J9YWV2 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC19.3■□□□□ 0.68
TRBV4-1A0A0J9YWV2 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TRBV4-1A0A0J9YWV2 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRBV4-1A0A0J9YWV2 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TRBV4-1A0A0J9YWV2 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRBV4-1A0A0J9YWV2 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.3■□□□□ 0.68
TRBV4-1A0A0J9YWV2 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRBV4-1A0A0J9YWV2 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRBV4-1A0A0J9YWV2 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRBV4-1A0A0J9YWV2 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.29■□□□□ 0.68
TRBV4-1A0A0J9YWV2 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
TRBV4-1A0A0J9YWV2 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRBV4-1A0A0J9YWV2 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.29■□□□□ 0.68
TRBV4-1A0A0J9YWV2 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
TRBV4-1A0A0J9YWV2 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRBV4-1A0A0J9YWV2 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TRBV4-1A0A0J9YWV2 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRBV4-1A0A0J9YWV2 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRBV4-1A0A0J9YWV2 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TRBV4-1A0A0J9YWV2 SF1-220ENST00000626028 704 ntTSL 2 BASIC19.29■□□□□ 0.68
TRBV4-1A0A0J9YWV2 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC19.29■□□□□ 0.68
TRBV4-1A0A0J9YWV2 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TRBV4-1A0A0J9YWV2 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRBV4-1A0A0J9YWV2 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.29■□□□□ 0.68
TRBV4-1A0A0J9YWV2 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.29■□□□□ 0.68
TRBV4-1A0A0J9YWV2 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
TRBV4-1A0A0J9YWV2 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRBV4-1A0A0J9YWV2 NARF-205ENST00000412079 1760 ntTSL 5 BASIC19.29■□□□□ 0.68
TRBV4-1A0A0J9YWV2 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
TRBV4-1A0A0J9YWV2 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRBV4-1A0A0J9YWV2 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRBV4-1A0A0J9YWV2 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.28■□□□□ 0.68
TRBV4-1A0A0J9YWV2 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TRBV4-1A0A0J9YWV2 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRBV4-1A0A0J9YWV2 PLK5-205ENST00000642079 1969 ntBASIC19.28■□□□□ 0.68
TRBV4-1A0A0J9YWV2 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TRBV4-1A0A0J9YWV2 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRBV4-1A0A0J9YWV2 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
TRBV4-1A0A0J9YWV2 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
TRBV4-1A0A0J9YWV2 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRBV4-1A0A0J9YWV2 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRBV4-1A0A0J9YWV2 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRBV4-1A0A0J9YWV2 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
TRBV4-1A0A0J9YWV2 SMUG1P1-201ENST00000590640 811 ntBASIC19.28■□□□□ 0.68
TRBV4-1A0A0J9YWV2 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRBV4-1A0A0J9YWV2 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.28■□□□□ 0.68
TRBV4-1A0A0J9YWV2 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRBV4-1A0A0J9YWV2 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.28■□□□□ 0.68
TRBV4-1A0A0J9YWV2 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC19.28■□□□□ 0.68
TRBV4-1A0A0J9YWV2 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRBV4-1A0A0J9YWV2 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRBV4-1A0A0J9YWV2 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC19.28■□□□□ 0.68
TRBV4-1A0A0J9YWV2 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
TRBV4-1A0A0J9YWV2 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TRBV4-1A0A0J9YWV2 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.28■□□□□ 0.68
TRBV4-1A0A0J9YWV2 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TRBV4-1A0A0J9YWV2 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms