Protein–RNA interactions for Protein: A0A0B4J272

TRAV24, T-cell receptor alpha variable 24 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV24A0A0B4J272 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRAV24A0A0B4J272 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TRAV24A0A0B4J272 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRAV24A0A0B4J272 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC17.68■□□□□ 0.42
TRAV24A0A0B4J272 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC17.68■□□□□ 0.42
TRAV24A0A0B4J272 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
TRAV24A0A0B4J272 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRAV24A0A0B4J272 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRAV24A0A0B4J272 PALM-207ENST00000590161 2137 ntTSL 4 BASIC17.68■□□□□ 0.42
TRAV24A0A0B4J272 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC17.68■□□□□ 0.42
TRAV24A0A0B4J272 EBPL-204ENST00000378272 766 ntTSL 3 BASIC17.68■□□□□ 0.42
TRAV24A0A0B4J272 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC17.68■□□□□ 0.42
TRAV24A0A0B4J272 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
TRAV24A0A0B4J272 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRAV24A0A0B4J272 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC17.68■□□□□ 0.42
TRAV24A0A0B4J272 AL139246.5-201ENST00000606645 996 ntBASIC17.68■□□□□ 0.42
TRAV24A0A0B4J272 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRAV24A0A0B4J272 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRAV24A0A0B4J272 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRAV24A0A0B4J272 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRAV24A0A0B4J272 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC17.68■□□□□ 0.42
TRAV24A0A0B4J272 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC17.68■□□□□ 0.42
TRAV24A0A0B4J272 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
TRAV24A0A0B4J272 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
TRAV24A0A0B4J272 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRAV24A0A0B4J272 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC17.67■□□□□ 0.42
TRAV24A0A0B4J272 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRAV24A0A0B4J272 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC17.67■□□□□ 0.42
TRAV24A0A0B4J272 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRAV24A0A0B4J272 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRAV24A0A0B4J272 STX5-203ENST00000394690 1568 ntTSL 5 BASIC17.67■□□□□ 0.42
TRAV24A0A0B4J272 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRAV24A0A0B4J272 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC17.67■□□□□ 0.42
TRAV24A0A0B4J272 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRAV24A0A0B4J272 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC17.67■□□□□ 0.42
TRAV24A0A0B4J272 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC17.67■□□□□ 0.42
TRAV24A0A0B4J272 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
TRAV24A0A0B4J272 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
TRAV24A0A0B4J272 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRAV24A0A0B4J272 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRAV24A0A0B4J272 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRAV24A0A0B4J272 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
TRAV24A0A0B4J272 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRAV24A0A0B4J272 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV24A0A0B4J272 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC17.66■□□□□ 0.42
TRAV24A0A0B4J272 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC17.66■□□□□ 0.42
TRAV24A0A0B4J272 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC17.66■□□□□ 0.42
TRAV24A0A0B4J272 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC17.66■□□□□ 0.42
TRAV24A0A0B4J272 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV24A0A0B4J272 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV24A0A0B4J272 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV24A0A0B4J272 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV24A0A0B4J272 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRAV24A0A0B4J272 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRAV24A0A0B4J272 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAV24A0A0B4J272 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
TRAV24A0A0B4J272 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAV24A0A0B4J272 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
TRAV24A0A0B4J272 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAV24A0A0B4J272 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAV24A0A0B4J272 FXN-202ENST00000396364 980 ntTSL 5 BASIC17.65■□□□□ 0.42
TRAV24A0A0B4J272 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
TRAV24A0A0B4J272 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC17.65■□□□□ 0.42
TRAV24A0A0B4J272 AC012414.1-201ENST00000556676 535 ntBASIC17.65■□□□□ 0.42
TRAV24A0A0B4J272 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAV24A0A0B4J272 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAV24A0A0B4J272 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAV24A0A0B4J272 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC17.65■□□□□ 0.42
TRAV24A0A0B4J272 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC17.65■□□□□ 0.42
TRAV24A0A0B4J272 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAV24A0A0B4J272 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAV24A0A0B4J272 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
TRAV24A0A0B4J272 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
TRAV24A0A0B4J272 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
TRAV24A0A0B4J272 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
TRAV24A0A0B4J272 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.42
TRAV24A0A0B4J272 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC17.64■□□□□ 0.41
TRAV24A0A0B4J272 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TRAV24A0A0B4J272 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC17.64■□□□□ 0.41
TRAV24A0A0B4J272 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRAV24A0A0B4J272 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TRAV24A0A0B4J272 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRAV24A0A0B4J272 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TRAV24A0A0B4J272 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC17.64■□□□□ 0.41
TRAV24A0A0B4J272 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC17.64■□□□□ 0.41
TRAV24A0A0B4J272 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC17.64■□□□□ 0.41
TRAV24A0A0B4J272 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRAV24A0A0B4J272 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC17.64■□□□□ 0.41
TRAV24A0A0B4J272 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TRAV24A0A0B4J272 MPST-204ENST00000404393 1329 ntTSL 5 BASIC17.64■□□□□ 0.41
TRAV24A0A0B4J272 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC17.64■□□□□ 0.41
TRAV24A0A0B4J272 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TRAV24A0A0B4J272 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TRAV24A0A0B4J272 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC17.64■□□□□ 0.41
TRAV24A0A0B4J272 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TRAV24A0A0B4J272 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC17.64■□□□□ 0.41
TRAV24A0A0B4J272 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TRAV24A0A0B4J272 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRAV24A0A0B4J272 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC17.63■□□□□ 0.41
TRAV24A0A0B4J272 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms