Protein–RNA interactions for Protein: A0A0A6YYJ7

TRAV8-3, T-cell receptor alpha variable 8-3 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-3A0A0A6YYJ7 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC14.88□□□□□ -0.03
TRAV8-3A0A0A6YYJ7 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC14.88□□□□□ -0.03
TRAV8-3A0A0A6YYJ7 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV8-3A0A0A6YYJ7 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC14.88□□□□□ -0.03
TRAV8-3A0A0A6YYJ7 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV8-3A0A0A6YYJ7 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC14.88□□□□□ -0.03
TRAV8-3A0A0A6YYJ7 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV8-3A0A0A6YYJ7 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC14.88□□□□□ -0.03
TRAV8-3A0A0A6YYJ7 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC14.88□□□□□ -0.03
TRAV8-3A0A0A6YYJ7 AL139246.5-201ENST00000606645 996 ntBASIC14.88□□□□□ -0.03
TRAV8-3A0A0A6YYJ7 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV8-3A0A0A6YYJ7 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV8-3A0A0A6YYJ7 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV8-3A0A0A6YYJ7 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV8-3A0A0A6YYJ7 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC14.88□□□□□ -0.03
TRAV8-3A0A0A6YYJ7 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV8-3A0A0A6YYJ7 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV8-3A0A0A6YYJ7 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
TRAV8-3A0A0A6YYJ7 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC14.87□□□□□ -0.03
TRAV8-3A0A0A6YYJ7 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
TRAV8-3A0A0A6YYJ7 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
TRAV8-3A0A0A6YYJ7 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC14.87□□□□□ -0.03
TRAV8-3A0A0A6YYJ7 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV8-3A0A0A6YYJ7 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV8-3A0A0A6YYJ7 PTMA-205ENST00000410064 814 ntTSL 2 BASIC14.87□□□□□ -0.03
TRAV8-3A0A0A6YYJ7 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV8-3A0A0A6YYJ7 PBX2P1-201ENST00000493219 1291 ntBASIC14.87□□□□□ -0.03
TRAV8-3A0A0A6YYJ7 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC14.87□□□□□ -0.03
TRAV8-3A0A0A6YYJ7 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC14.87□□□□□ -0.03
TRAV8-3A0A0A6YYJ7 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV8-3A0A0A6YYJ7 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC14.87□□□□□ -0.03
TRAV8-3A0A0A6YYJ7 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
TRAV8-3A0A0A6YYJ7 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
TRAV8-3A0A0A6YYJ7 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV8-3A0A0A6YYJ7 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV8-3A0A0A6YYJ7 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV8-3A0A0A6YYJ7 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC14.87□□□□□ -0.03
TRAV8-3A0A0A6YYJ7 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV8-3A0A0A6YYJ7 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV8-3A0A0A6YYJ7 LINC01960-201ENST00000563759 1884 ntBASIC14.86□□□□□ -0.03
TRAV8-3A0A0A6YYJ7 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
TRAV8-3A0A0A6YYJ7 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC14.86□□□□□ -0.03
TRAV8-3A0A0A6YYJ7 ME2-206ENST00000638410 2289 ntTSL 5 BASIC14.86□□□□□ -0.03
TRAV8-3A0A0A6YYJ7 ME2-210ENST00000639255 2262 ntTSL 5 BASIC14.86□□□□□ -0.03
TRAV8-3A0A0A6YYJ7 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV8-3A0A0A6YYJ7 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC14.86□□□□□ -0.03
TRAV8-3A0A0A6YYJ7 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
TRAV8-3A0A0A6YYJ7 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV8-3A0A0A6YYJ7 AC106739.1-201ENST00000617035 715 ntBASIC14.86□□□□□ -0.03
TRAV8-3A0A0A6YYJ7 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
TRAV8-3A0A0A6YYJ7 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV8-3A0A0A6YYJ7 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV8-3A0A0A6YYJ7 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV8-3A0A0A6YYJ7 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
TRAV8-3A0A0A6YYJ7 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV8-3A0A0A6YYJ7 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV8-3A0A0A6YYJ7 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV8-3A0A0A6YYJ7 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC14.85□□□□□ -0.03
TRAV8-3A0A0A6YYJ7 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV8-3A0A0A6YYJ7 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV8-3A0A0A6YYJ7 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV8-3A0A0A6YYJ7 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV8-3A0A0A6YYJ7 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC14.85□□□□□ -0.03
TRAV8-3A0A0A6YYJ7 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
TRAV8-3A0A0A6YYJ7 Z98882.1-201ENST00000622160 2253 ntBASIC14.85□□□□□ -0.03
TRAV8-3A0A0A6YYJ7 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC14.85□□□□□ -0.03
TRAV8-3A0A0A6YYJ7 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC14.85□□□□□ -0.03
TRAV8-3A0A0A6YYJ7 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
TRAV8-3A0A0A6YYJ7 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV8-3A0A0A6YYJ7 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV8-3A0A0A6YYJ7 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC14.85□□□□□ -0.03
TRAV8-3A0A0A6YYJ7 AC024257.2-201ENST00000549699 147 ntBASIC14.85□□□□□ -0.03
TRAV8-3A0A0A6YYJ7 AC133561.4-201ENST00000566112 224 ntBASIC14.85□□□□□ -0.03
TRAV8-3A0A0A6YYJ7 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC14.85□□□□□ -0.03
TRAV8-3A0A0A6YYJ7 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC14.85□□□□□ -0.03
TRAV8-3A0A0A6YYJ7 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV8-3A0A0A6YYJ7 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV8-3A0A0A6YYJ7 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV8-3A0A0A6YYJ7 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV8-3A0A0A6YYJ7 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV8-3A0A0A6YYJ7 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV8-3A0A0A6YYJ7 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
TRAV8-3A0A0A6YYJ7 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC14.85□□□□□ -0.03
TRAV8-3A0A0A6YYJ7 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC14.85□□□□□ -0.03
TRAV8-3A0A0A6YYJ7 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV8-3A0A0A6YYJ7 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
TRAV8-3A0A0A6YYJ7 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV8-3A0A0A6YYJ7 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC14.84□□□□□ -0.03
TRAV8-3A0A0A6YYJ7 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV8-3A0A0A6YYJ7 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC14.84□□□□□ -0.03
TRAV8-3A0A0A6YYJ7 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC14.84□□□□□ -0.03
TRAV8-3A0A0A6YYJ7 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV8-3A0A0A6YYJ7 EDA-201ENST00000338901 1233 ntBASIC14.84□□□□□ -0.03
TRAV8-3A0A0A6YYJ7 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
TRAV8-3A0A0A6YYJ7 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC14.84□□□□□ -0.03
TRAV8-3A0A0A6YYJ7 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC14.84□□□□□ -0.03
TRAV8-3A0A0A6YYJ7 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC14.84□□□□□ -0.03
TRAV8-3A0A0A6YYJ7 AC068587.7-201ENST00000641602 218 ntBASIC14.84□□□□□ -0.03
TRAV8-3A0A0A6YYJ7 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV8-3A0A0A6YYJ7 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms