Protein–RNA interactions for Protein: Q9Y6B7

AP4B1, AP-4 complex subunit beta-1, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4B1Q9Y6B7 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
AP4B1Q9Y6B7 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC20.18■□□□□ 0.82
AP4B1Q9Y6B7 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
AP4B1Q9Y6B7 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
AP4B1Q9Y6B7 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.18■□□□□ 0.82
AP4B1Q9Y6B7 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
AP4B1Q9Y6B7 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
AP4B1Q9Y6B7 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
AP4B1Q9Y6B7 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
AP4B1Q9Y6B7 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
AP4B1Q9Y6B7 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC20.18■□□□□ 0.82
AP4B1Q9Y6B7 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
AP4B1Q9Y6B7 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
AP4B1Q9Y6B7 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC20.18■□□□□ 0.82
AP4B1Q9Y6B7 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC20.18■□□□□ 0.82
AP4B1Q9Y6B7 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
AP4B1Q9Y6B7 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
AP4B1Q9Y6B7 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC20.17■□□□□ 0.82
AP4B1Q9Y6B7 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
AP4B1Q9Y6B7 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
AP4B1Q9Y6B7 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
AP4B1Q9Y6B7 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
AP4B1Q9Y6B7 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
AP4B1Q9Y6B7 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
AP4B1Q9Y6B7 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
AP4B1Q9Y6B7 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
AP4B1Q9Y6B7 AC110285.6-201ENST00000617652 491 ntBASIC20.17■□□□□ 0.82
AP4B1Q9Y6B7 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
AP4B1Q9Y6B7 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
AP4B1Q9Y6B7 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.17■□□□□ 0.82
AP4B1Q9Y6B7 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
AP4B1Q9Y6B7 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
AP4B1Q9Y6B7 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
AP4B1Q9Y6B7 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
AP4B1Q9Y6B7 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
AP4B1Q9Y6B7 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
AP4B1Q9Y6B7 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
AP4B1Q9Y6B7 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.16■□□□□ 0.82
AP4B1Q9Y6B7 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
AP4B1Q9Y6B7 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC20.16■□□□□ 0.82
AP4B1Q9Y6B7 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
AP4B1Q9Y6B7 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.16■□□□□ 0.82
AP4B1Q9Y6B7 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
AP4B1Q9Y6B7 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.16■□□□□ 0.82
AP4B1Q9Y6B7 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
AP4B1Q9Y6B7 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
AP4B1Q9Y6B7 DUX4L4-201ENST00000566884 1269 ntBASIC20.16■□□□□ 0.82
AP4B1Q9Y6B7 AL136162.1-201ENST00000607711 1078 ntBASIC20.16■□□□□ 0.82
AP4B1Q9Y6B7 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
AP4B1Q9Y6B7 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
AP4B1Q9Y6B7 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
AP4B1Q9Y6B7 LINC01529-204ENST00000636474 1715 ntBASIC20.16■□□□□ 0.82
AP4B1Q9Y6B7 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
AP4B1Q9Y6B7 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
AP4B1Q9Y6B7 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
AP4B1Q9Y6B7 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
AP4B1Q9Y6B7 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
AP4B1Q9Y6B7 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
AP4B1Q9Y6B7 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
AP4B1Q9Y6B7 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
AP4B1Q9Y6B7 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.15■□□□□ 0.82
AP4B1Q9Y6B7 AC133561.4-201ENST00000566112 224 ntBASIC20.15■□□□□ 0.82
AP4B1Q9Y6B7 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC20.15■□□□□ 0.82
AP4B1Q9Y6B7 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
AP4B1Q9Y6B7 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
AP4B1Q9Y6B7 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
AP4B1Q9Y6B7 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
AP4B1Q9Y6B7 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
AP4B1Q9Y6B7 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
AP4B1Q9Y6B7 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.15■□□□□ 0.82
AP4B1Q9Y6B7 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
AP4B1Q9Y6B7 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
AP4B1Q9Y6B7 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.14■□□□□ 0.82
AP4B1Q9Y6B7 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.14■□□□□ 0.81
AP4B1Q9Y6B7 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
AP4B1Q9Y6B7 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
AP4B1Q9Y6B7 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.14■□□□□ 0.81
AP4B1Q9Y6B7 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
AP4B1Q9Y6B7 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
AP4B1Q9Y6B7 AC135279.3-201ENST00000610945 1311 ntBASIC20.14■□□□□ 0.81
AP4B1Q9Y6B7 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
AP4B1Q9Y6B7 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20.14■□□□□ 0.81
AP4B1Q9Y6B7 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
AP4B1Q9Y6B7 SERBP1P1-201ENST00000396021 1160 ntBASIC20.14■□□□□ 0.81
AP4B1Q9Y6B7 AC006455.2-201ENST00000429931 906 ntBASIC20.14■□□□□ 0.81
AP4B1Q9Y6B7 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
AP4B1Q9Y6B7 PBX2P1-201ENST00000493219 1291 ntBASIC20.14■□□□□ 0.81
AP4B1Q9Y6B7 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20.14■□□□□ 0.81
AP4B1Q9Y6B7 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
AP4B1Q9Y6B7 AC106739.1-201ENST00000617035 715 ntBASIC20.14■□□□□ 0.81
AP4B1Q9Y6B7 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.14■□□□□ 0.81
AP4B1Q9Y6B7 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
AP4B1Q9Y6B7 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.14■□□□□ 0.81
AP4B1Q9Y6B7 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
AP4B1Q9Y6B7 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
AP4B1Q9Y6B7 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
AP4B1Q9Y6B7 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
AP4B1Q9Y6B7 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
AP4B1Q9Y6B7 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
AP4B1Q9Y6B7 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms