Protein–RNA interactions for Protein: Q9Y6A2

CYP46A1, Cholesterol 24-hydroxylase, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP46A1Q9Y6A2 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC25.08■■□□□ 1.61
CYP46A1Q9Y6A2 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC25.08■■□□□ 1.61
CYP46A1Q9Y6A2 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
CYP46A1Q9Y6A2 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC25.08■■□□□ 1.61
CYP46A1Q9Y6A2 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
CYP46A1Q9Y6A2 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC25.08■■□□□ 1.61
CYP46A1Q9Y6A2 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC25.08■■□□□ 1.61
CYP46A1Q9Y6A2 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC25.08■■□□□ 1.6
CYP46A1Q9Y6A2 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC25.08■■□□□ 1.6
CYP46A1Q9Y6A2 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
CYP46A1Q9Y6A2 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
CYP46A1Q9Y6A2 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
CYP46A1Q9Y6A2 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC25.07■■□□□ 1.6
CYP46A1Q9Y6A2 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC25.07■■□□□ 1.6
CYP46A1Q9Y6A2 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC25.07■■□□□ 1.6
CYP46A1Q9Y6A2 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC25.07■■□□□ 1.6
CYP46A1Q9Y6A2 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC25.07■■□□□ 1.6
CYP46A1Q9Y6A2 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC25.07■■□□□ 1.6
CYP46A1Q9Y6A2 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
CYP46A1Q9Y6A2 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC25.07■■□□□ 1.6
CYP46A1Q9Y6A2 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC25.07■■□□□ 1.6
CYP46A1Q9Y6A2 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC25.07■■□□□ 1.6
CYP46A1Q9Y6A2 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
CYP46A1Q9Y6A2 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
CYP46A1Q9Y6A2 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
CYP46A1Q9Y6A2 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
CYP46A1Q9Y6A2 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC25.06■■□□□ 1.6
CYP46A1Q9Y6A2 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC25.06■■□□□ 1.6
CYP46A1Q9Y6A2 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
CYP46A1Q9Y6A2 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
CYP46A1Q9Y6A2 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
CYP46A1Q9Y6A2 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
CYP46A1Q9Y6A2 NARF-205ENST00000412079 1760 ntTSL 5 BASIC25.05■■□□□ 1.6
CYP46A1Q9Y6A2 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
CYP46A1Q9Y6A2 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
CYP46A1Q9Y6A2 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
CYP46A1Q9Y6A2 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
CYP46A1Q9Y6A2 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
CYP46A1Q9Y6A2 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
CYP46A1Q9Y6A2 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
CYP46A1Q9Y6A2 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC25.05■■□□□ 1.6
CYP46A1Q9Y6A2 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
CYP46A1Q9Y6A2 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC25.05■■□□□ 1.6
CYP46A1Q9Y6A2 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
CYP46A1Q9Y6A2 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC25.05■■□□□ 1.6
CYP46A1Q9Y6A2 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC25.05■■□□□ 1.6
CYP46A1Q9Y6A2 PARN-205ENST00000539279 1557 ntTSL 2 BASIC25.05■■□□□ 1.6
CYP46A1Q9Y6A2 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC25.05■■□□□ 1.6
CYP46A1Q9Y6A2 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
CYP46A1Q9Y6A2 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
CYP46A1Q9Y6A2 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC25.04■■□□□ 1.6
CYP46A1Q9Y6A2 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC25.04■■□□□ 1.6
CYP46A1Q9Y6A2 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC25.04■■□□□ 1.6
CYP46A1Q9Y6A2 AC012414.1-201ENST00000556676 535 ntBASIC25.04■■□□□ 1.6
CYP46A1Q9Y6A2 MPST-204ENST00000404393 1329 ntTSL 5 BASIC25.04■■□□□ 1.6
CYP46A1Q9Y6A2 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
CYP46A1Q9Y6A2 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC25.04■■□□□ 1.6
CYP46A1Q9Y6A2 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC25.04■■□□□ 1.6
CYP46A1Q9Y6A2 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
CYP46A1Q9Y6A2 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
CYP46A1Q9Y6A2 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC25.03■■□□□ 1.6
CYP46A1Q9Y6A2 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
CYP46A1Q9Y6A2 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
CYP46A1Q9Y6A2 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
CYP46A1Q9Y6A2 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
CYP46A1Q9Y6A2 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC25.03■■□□□ 1.6
CYP46A1Q9Y6A2 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
CYP46A1Q9Y6A2 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
CYP46A1Q9Y6A2 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC25.03■■□□□ 1.6
CYP46A1Q9Y6A2 AC142381.2-201ENST00000566120 298 ntBASIC25.03■■□□□ 1.6
CYP46A1Q9Y6A2 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC25.03■■□□□ 1.6
CYP46A1Q9Y6A2 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC25.03■■□□□ 1.6
CYP46A1Q9Y6A2 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC25.03■■□□□ 1.6
CYP46A1Q9Y6A2 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC25.03■■□□□ 1.6
CYP46A1Q9Y6A2 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC25.02■■□□□ 1.6
CYP46A1Q9Y6A2 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
CYP46A1Q9Y6A2 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
CYP46A1Q9Y6A2 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
CYP46A1Q9Y6A2 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC25.02■■□□□ 1.6
CYP46A1Q9Y6A2 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC25.02■■□□□ 1.6
CYP46A1Q9Y6A2 FXN-202ENST00000396364 980 ntTSL 5 BASIC25.02■■□□□ 1.6
CYP46A1Q9Y6A2 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC25.02■■□□□ 1.6
CYP46A1Q9Y6A2 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC25.02■■□□□ 1.6
CYP46A1Q9Y6A2 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC25.02■■□□□ 1.6
CYP46A1Q9Y6A2 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
CYP46A1Q9Y6A2 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
CYP46A1Q9Y6A2 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC25.02■■□□□ 1.6
CYP46A1Q9Y6A2 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC25.02■■□□□ 1.6
CYP46A1Q9Y6A2 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
CYP46A1Q9Y6A2 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
CYP46A1Q9Y6A2 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC25.02■■□□□ 1.6
CYP46A1Q9Y6A2 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
CYP46A1Q9Y6A2 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
CYP46A1Q9Y6A2 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
CYP46A1Q9Y6A2 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC25.01■■□□□ 1.59
CYP46A1Q9Y6A2 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
CYP46A1Q9Y6A2 AL049796.1-201ENST00000565336 1766 ntBASIC25.01■■□□□ 1.59
CYP46A1Q9Y6A2 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC25.01■■□□□ 1.59
CYP46A1Q9Y6A2 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
CYP46A1Q9Y6A2 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC25.01■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms