Protein–RNA interactions for Protein: Q9Y5E7

PCDHB2, Protocadherin beta-2, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB2Q9Y5E7 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC23.2■■□□□ 1.3
PCDHB2Q9Y5E7 C11orf96-202ENST00000528572 1834 ntBASIC23.19■■□□□ 1.3
PCDHB2Q9Y5E7 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
PCDHB2Q9Y5E7 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
PCDHB2Q9Y5E7 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PCDHB2Q9Y5E7 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PCDHB2Q9Y5E7 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PCDHB2Q9Y5E7 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PCDHB2Q9Y5E7 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
PCDHB2Q9Y5E7 NCF1B-203ENST00000435988 1254 ntBASIC23.19■■□□□ 1.3
PCDHB2Q9Y5E7 DENND3-207ENST00000518347 850 ntTSL 2 BASIC23.19■■□□□ 1.3
PCDHB2Q9Y5E7 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
PCDHB2Q9Y5E7 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC23.19■■□□□ 1.3
PCDHB2Q9Y5E7 KRT18P20-201ENST00000548986 1279 ntBASIC23.19■■□□□ 1.3
PCDHB2Q9Y5E7 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC23.19■■□□□ 1.3
PCDHB2Q9Y5E7 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC23.19■■□□□ 1.3
PCDHB2Q9Y5E7 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
PCDHB2Q9Y5E7 AC053503.5-201ENST00000601508 636 ntBASIC23.19■■□□□ 1.3
PCDHB2Q9Y5E7 AC104771.1-201ENST00000603335 964 ntBASIC23.19■■□□□ 1.3
PCDHB2Q9Y5E7 MAZ-216ENST00000616501 991 ntTSL 5 BASIC23.19■■□□□ 1.3
PCDHB2Q9Y5E7 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC23.18■■□□□ 1.3
PCDHB2Q9Y5E7 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC23.18■■□□□ 1.3
PCDHB2Q9Y5E7 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PCDHB2Q9Y5E7 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PCDHB2Q9Y5E7 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
PCDHB2Q9Y5E7 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC23.18■■□□□ 1.3
PCDHB2Q9Y5E7 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PCDHB2Q9Y5E7 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PCDHB2Q9Y5E7 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
PCDHB2Q9Y5E7 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC23.18■■□□□ 1.3
PCDHB2Q9Y5E7 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC23.18■■□□□ 1.3
PCDHB2Q9Y5E7 AC231657.2-201ENST00000624556 255 ntBASIC23.18■■□□□ 1.3
PCDHB2Q9Y5E7 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PCDHB2Q9Y5E7 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
PCDHB2Q9Y5E7 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PCDHB2Q9Y5E7 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PCDHB2Q9Y5E7 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
PCDHB2Q9Y5E7 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
PCDHB2Q9Y5E7 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PCDHB2Q9Y5E7 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PCDHB2Q9Y5E7 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC23.18■■□□□ 1.3
PCDHB2Q9Y5E7 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PCDHB2Q9Y5E7 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PCDHB2Q9Y5E7 LINC00565-201ENST00000562710 2331 ntBASIC23.17■■□□□ 1.3
PCDHB2Q9Y5E7 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
PCDHB2Q9Y5E7 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
PCDHB2Q9Y5E7 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
PCDHB2Q9Y5E7 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PCDHB2Q9Y5E7 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC23.17■■□□□ 1.3
PCDHB2Q9Y5E7 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PCDHB2Q9Y5E7 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC23.17■■□□□ 1.3
PCDHB2Q9Y5E7 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PCDHB2Q9Y5E7 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
PCDHB2Q9Y5E7 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
PCDHB2Q9Y5E7 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
PCDHB2Q9Y5E7 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
PCDHB2Q9Y5E7 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC23.17■■□□□ 1.3
PCDHB2Q9Y5E7 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
PCDHB2Q9Y5E7 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
PCDHB2Q9Y5E7 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PCDHB2Q9Y5E7 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PCDHB2Q9Y5E7 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
PCDHB2Q9Y5E7 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
PCDHB2Q9Y5E7 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PCDHB2Q9Y5E7 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC23.16■■□□□ 1.3
PCDHB2Q9Y5E7 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC23.16■■□□□ 1.3
PCDHB2Q9Y5E7 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC23.16■■□□□ 1.3
PCDHB2Q9Y5E7 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC23.16■■□□□ 1.3
PCDHB2Q9Y5E7 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC23.16■■□□□ 1.3
PCDHB2Q9Y5E7 AL109923.1-201ENST00000618799 583 ntBASIC23.16■■□□□ 1.3
PCDHB2Q9Y5E7 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
PCDHB2Q9Y5E7 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
PCDHB2Q9Y5E7 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
PCDHB2Q9Y5E7 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC23.16■■□□□ 1.3
PCDHB2Q9Y5E7 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
PCDHB2Q9Y5E7 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PCDHB2Q9Y5E7 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
PCDHB2Q9Y5E7 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
PCDHB2Q9Y5E7 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
PCDHB2Q9Y5E7 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC23.16■■□□□ 1.3
PCDHB2Q9Y5E7 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PCDHB2Q9Y5E7 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PCDHB2Q9Y5E7 MYB-221ENST00000527615 2381 ntTSL 5 BASIC23.15■■□□□ 1.3
PCDHB2Q9Y5E7 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC23.15■■□□□ 1.3
PCDHB2Q9Y5E7 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
PCDHB2Q9Y5E7 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PCDHB2Q9Y5E7 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
PCDHB2Q9Y5E7 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PCDHB2Q9Y5E7 AC007322.1-201ENST00000426983 750 ntBASIC23.15■■□□□ 1.3
PCDHB2Q9Y5E7 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC23.15■■□□□ 1.3
PCDHB2Q9Y5E7 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC23.15■■□□□ 1.3
PCDHB2Q9Y5E7 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC23.15■■□□□ 1.3
PCDHB2Q9Y5E7 WT1-AS_3.1-201ENST00000613262 234 ntBASIC23.15■■□□□ 1.3
PCDHB2Q9Y5E7 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
PCDHB2Q9Y5E7 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PCDHB2Q9Y5E7 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
PCDHB2Q9Y5E7 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PCDHB2Q9Y5E7 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC23.14■■□□□ 1.3
PCDHB2Q9Y5E7 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.3
PCDHB2Q9Y5E7 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms