Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC20.06■□□□□ 0.8
LRCH1Q9Y2L9 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
LRCH1Q9Y2L9 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
LRCH1Q9Y2L9 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
LRCH1Q9Y2L9 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LRCH1Q9Y2L9 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
LRCH1Q9Y2L9 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC20.05■□□□□ 0.8
LRCH1Q9Y2L9 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC20.05■□□□□ 0.8
LRCH1Q9Y2L9 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LRCH1Q9Y2L9 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LRCH1Q9Y2L9 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
LRCH1Q9Y2L9 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LRCH1Q9Y2L9 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
LRCH1Q9Y2L9 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC20.05■□□□□ 0.8
LRCH1Q9Y2L9 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
LRCH1Q9Y2L9 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LRCH1Q9Y2L9 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
LRCH1Q9Y2L9 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LRCH1Q9Y2L9 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LRCH1Q9Y2L9 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LRCH1Q9Y2L9 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
LRCH1Q9Y2L9 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
LRCH1Q9Y2L9 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
LRCH1Q9Y2L9 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
LRCH1Q9Y2L9 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LRCH1Q9Y2L9 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LRCH1Q9Y2L9 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LRCH1Q9Y2L9 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
LRCH1Q9Y2L9 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC20.04■□□□□ 0.8
LRCH1Q9Y2L9 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC20.04■□□□□ 0.8
LRCH1Q9Y2L9 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
LRCH1Q9Y2L9 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
LRCH1Q9Y2L9 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
LRCH1Q9Y2L9 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
LRCH1Q9Y2L9 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
LRCH1Q9Y2L9 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.04■□□□□ 0.8
LRCH1Q9Y2L9 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.03■□□□□ 0.8
LRCH1Q9Y2L9 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LRCH1Q9Y2L9 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
LRCH1Q9Y2L9 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC20.03■□□□□ 0.8
LRCH1Q9Y2L9 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
LRCH1Q9Y2L9 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LRCH1Q9Y2L9 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
LRCH1Q9Y2L9 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
LRCH1Q9Y2L9 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
LRCH1Q9Y2L9 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
LRCH1Q9Y2L9 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
LRCH1Q9Y2L9 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.03■□□□□ 0.8
LRCH1Q9Y2L9 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LRCH1Q9Y2L9 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC20.03■□□□□ 0.8
LRCH1Q9Y2L9 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC20.03■□□□□ 0.8
LRCH1Q9Y2L9 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC20.03■□□□□ 0.8
LRCH1Q9Y2L9 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LRCH1Q9Y2L9 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.03■□□□□ 0.8
LRCH1Q9Y2L9 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC20.03■□□□□ 0.8
LRCH1Q9Y2L9 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
LRCH1Q9Y2L9 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LRCH1Q9Y2L9 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LRCH1Q9Y2L9 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
LRCH1Q9Y2L9 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
LRCH1Q9Y2L9 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LRCH1Q9Y2L9 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
LRCH1Q9Y2L9 AL049796.1-201ENST00000565336 1766 ntBASIC20.03■□□□□ 0.8
LRCH1Q9Y2L9 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC20.03■□□□□ 0.8
LRCH1Q9Y2L9 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
LRCH1Q9Y2L9 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.03■□□□□ 0.8
LRCH1Q9Y2L9 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LRCH1Q9Y2L9 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
LRCH1Q9Y2L9 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LRCH1Q9Y2L9 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
LRCH1Q9Y2L9 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
LRCH1Q9Y2L9 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
LRCH1Q9Y2L9 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LRCH1Q9Y2L9 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
LRCH1Q9Y2L9 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
LRCH1Q9Y2L9 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LRCH1Q9Y2L9 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LRCH1Q9Y2L9 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC20.02■□□□□ 0.8
LRCH1Q9Y2L9 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
LRCH1Q9Y2L9 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
LRCH1Q9Y2L9 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
LRCH1Q9Y2L9 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
LRCH1Q9Y2L9 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC20.02■□□□□ 0.79
LRCH1Q9Y2L9 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
LRCH1Q9Y2L9 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.02■□□□□ 0.79
LRCH1Q9Y2L9 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
LRCH1Q9Y2L9 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LRCH1Q9Y2L9 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.01■□□□□ 0.79
LRCH1Q9Y2L9 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
LRCH1Q9Y2L9 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
LRCH1Q9Y2L9 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LRCH1Q9Y2L9 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
LRCH1Q9Y2L9 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.01■□□□□ 0.79
LRCH1Q9Y2L9 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LRCH1Q9Y2L9 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LRCH1Q9Y2L9 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
LRCH1Q9Y2L9 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC20.01■□□□□ 0.79
LRCH1Q9Y2L9 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC20.01■□□□□ 0.79
LRCH1Q9Y2L9 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
LRCH1Q9Y2L9 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms