Protein–RNA interactions for Protein: Q9C0K7

STRADB, STE20-related kinase adapter protein beta, humanhuman

Predictions only

Length 418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STRADBQ9C0K7 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
STRADBQ9C0K7 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
STRADBQ9C0K7 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
STRADBQ9C0K7 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
STRADBQ9C0K7 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC20.16■□□□□ 0.82
STRADBQ9C0K7 RARRES2P4-201ENST00000514074 484 ntBASIC20.16■□□□□ 0.82
STRADBQ9C0K7 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
STRADBQ9C0K7 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC20.16■□□□□ 0.82
STRADBQ9C0K7 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
STRADBQ9C0K7 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
STRADBQ9C0K7 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
STRADBQ9C0K7 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
STRADBQ9C0K7 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
STRADBQ9C0K7 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.16■□□□□ 0.82
STRADBQ9C0K7 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.16■□□□□ 0.82
STRADBQ9C0K7 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.16■□□□□ 0.82
STRADBQ9C0K7 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.15■□□□□ 0.82
STRADBQ9C0K7 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
STRADBQ9C0K7 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC20.15■□□□□ 0.82
STRADBQ9C0K7 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC20.15■□□□□ 0.82
STRADBQ9C0K7 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC20.15■□□□□ 0.82
STRADBQ9C0K7 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
STRADBQ9C0K7 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
STRADBQ9C0K7 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
STRADBQ9C0K7 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
STRADBQ9C0K7 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.15■□□□□ 0.82
STRADBQ9C0K7 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
STRADBQ9C0K7 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
STRADBQ9C0K7 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
STRADBQ9C0K7 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
STRADBQ9C0K7 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
STRADBQ9C0K7 AC010980.2-201ENST00000587099 1412 ntBASIC20.14■□□□□ 0.81
STRADBQ9C0K7 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
STRADBQ9C0K7 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
STRADBQ9C0K7 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
STRADBQ9C0K7 SERPINH1P1-201ENST00000419794 1249 ntBASIC20.14■□□□□ 0.81
STRADBQ9C0K7 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
STRADBQ9C0K7 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC20.14■□□□□ 0.81
STRADBQ9C0K7 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
STRADBQ9C0K7 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
STRADBQ9C0K7 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
STRADBQ9C0K7 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
STRADBQ9C0K7 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
STRADBQ9C0K7 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
STRADBQ9C0K7 AC087742.1-201ENST00000575880 1738 ntBASIC20.13■□□□□ 0.81
STRADBQ9C0K7 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
STRADBQ9C0K7 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
STRADBQ9C0K7 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
STRADBQ9C0K7 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
STRADBQ9C0K7 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC20.13■□□□□ 0.81
STRADBQ9C0K7 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
STRADBQ9C0K7 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC20.13■□□□□ 0.81
STRADBQ9C0K7 BET1L-207ENST00000529614 560 ntTSL 5 BASIC20.13■□□□□ 0.81
STRADBQ9C0K7 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC20.13■□□□□ 0.81
STRADBQ9C0K7 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC20.13■□□□□ 0.81
STRADBQ9C0K7 AC083880.1-201ENST00000608266 535 ntBASIC20.13■□□□□ 0.81
STRADBQ9C0K7 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
STRADBQ9C0K7 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.13■□□□□ 0.81
STRADBQ9C0K7 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20.13■□□□□ 0.81
STRADBQ9C0K7 MYC-209ENST00000641252 345 ntBASIC20.13■□□□□ 0.81
STRADBQ9C0K7 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
STRADBQ9C0K7 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
STRADBQ9C0K7 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
STRADBQ9C0K7 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
STRADBQ9C0K7 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
STRADBQ9C0K7 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
STRADBQ9C0K7 AC139530.1-201ENST00000575312 1977 ntBASIC20.12■□□□□ 0.81
STRADBQ9C0K7 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
STRADBQ9C0K7 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
STRADBQ9C0K7 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
STRADBQ9C0K7 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC20.12■□□□□ 0.81
STRADBQ9C0K7 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC20.12■□□□□ 0.81
STRADBQ9C0K7 AC091874.3-201ENST00000512672 1195 ntBASIC20.12■□□□□ 0.81
STRADBQ9C0K7 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
STRADBQ9C0K7 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
STRADBQ9C0K7 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC20.11■□□□□ 0.81
STRADBQ9C0K7 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
STRADBQ9C0K7 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
STRADBQ9C0K7 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
STRADBQ9C0K7 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.11■□□□□ 0.81
STRADBQ9C0K7 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
STRADBQ9C0K7 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
STRADBQ9C0K7 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
STRADBQ9C0K7 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC20.11■□□□□ 0.81
STRADBQ9C0K7 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
STRADBQ9C0K7 PRORSD1P-201ENST00000295112 541 ntBASIC20.11■□□□□ 0.81
STRADBQ9C0K7 ESRRAP1-201ENST00000400596 1257 ntBASIC20.11■□□□□ 0.81
STRADBQ9C0K7 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
STRADBQ9C0K7 DUSP5P2-201ENST00000426873 1033 ntBASIC20.11■□□□□ 0.81
STRADBQ9C0K7 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
STRADBQ9C0K7 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC20.11■□□□□ 0.81
STRADBQ9C0K7 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
STRADBQ9C0K7 AP006294.2-201ENST00000641667 209 ntBASIC20.11■□□□□ 0.81
STRADBQ9C0K7 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
STRADBQ9C0K7 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
STRADBQ9C0K7 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
STRADBQ9C0K7 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC20.11■□□□□ 0.81
STRADBQ9C0K7 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
STRADBQ9C0K7 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
STRADBQ9C0K7 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms