Protein–RNA interactions for Protein: Q9BQE3

TUBA1C, Tubulin alpha-1C chain, humanhuman

Predictions only

Length 449 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1CQ9BQE3 FEM1AP4-201ENST00000443167 1987 ntBASIC19.87■□□□□ 0.77
TUBA1CQ9BQE3 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC19.87■□□□□ 0.77
TUBA1CQ9BQE3 IRS3P-201ENST00000223076 1006 ntBASIC19.87■□□□□ 0.77
TUBA1CQ9BQE3 OR2I1P-207ENST00000453522 948 ntBASIC19.87■□□□□ 0.77
TUBA1CQ9BQE3 RHOF-204ENST00000537265 699 ntTSL 2 BASIC19.87■□□□□ 0.77
TUBA1CQ9BQE3 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
TUBA1CQ9BQE3 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
TUBA1CQ9BQE3 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TUBA1CQ9BQE3 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.87■□□□□ 0.77
TUBA1CQ9BQE3 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TUBA1CQ9BQE3 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
TUBA1CQ9BQE3 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TUBA1CQ9BQE3 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
TUBA1CQ9BQE3 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
TUBA1CQ9BQE3 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TUBA1CQ9BQE3 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TUBA1CQ9BQE3 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
TUBA1CQ9BQE3 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
TUBA1CQ9BQE3 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC19.86■□□□□ 0.77
TUBA1CQ9BQE3 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.86■□□□□ 0.77
TUBA1CQ9BQE3 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
TUBA1CQ9BQE3 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TUBA1CQ9BQE3 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TUBA1CQ9BQE3 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.86■□□□□ 0.77
TUBA1CQ9BQE3 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.86■□□□□ 0.77
TUBA1CQ9BQE3 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TUBA1CQ9BQE3 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.86■□□□□ 0.77
TUBA1CQ9BQE3 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TUBA1CQ9BQE3 Z98882.1-201ENST00000622160 2253 ntBASIC19.86■□□□□ 0.77
TUBA1CQ9BQE3 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
TUBA1CQ9BQE3 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TUBA1CQ9BQE3 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.85■□□□□ 0.77
TUBA1CQ9BQE3 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TUBA1CQ9BQE3 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TUBA1CQ9BQE3 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.85■□□□□ 0.77
TUBA1CQ9BQE3 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
TUBA1CQ9BQE3 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
TUBA1CQ9BQE3 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
TUBA1CQ9BQE3 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC19.85■□□□□ 0.77
TUBA1CQ9BQE3 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.85■□□□□ 0.77
TUBA1CQ9BQE3 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.85■□□□□ 0.77
TUBA1CQ9BQE3 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
TUBA1CQ9BQE3 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TUBA1CQ9BQE3 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.85■□□□□ 0.77
TUBA1CQ9BQE3 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TUBA1CQ9BQE3 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TUBA1CQ9BQE3 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TUBA1CQ9BQE3 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC19.84■□□□□ 0.77
TUBA1CQ9BQE3 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
TUBA1CQ9BQE3 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
TUBA1CQ9BQE3 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
TUBA1CQ9BQE3 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TUBA1CQ9BQE3 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TUBA1CQ9BQE3 TSPY26P-201ENST00000476365 1326 ntBASIC19.84■□□□□ 0.77
TUBA1CQ9BQE3 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
TUBA1CQ9BQE3 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TUBA1CQ9BQE3 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
TUBA1CQ9BQE3 AC026271.2-201ENST00000428091 497 ntBASIC19.84■□□□□ 0.77
TUBA1CQ9BQE3 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TUBA1CQ9BQE3 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
TUBA1CQ9BQE3 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TUBA1CQ9BQE3 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
TUBA1CQ9BQE3 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TUBA1CQ9BQE3 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
TUBA1CQ9BQE3 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
TUBA1CQ9BQE3 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
TUBA1CQ9BQE3 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TUBA1CQ9BQE3 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TUBA1CQ9BQE3 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.83■□□□□ 0.77
TUBA1CQ9BQE3 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
TUBA1CQ9BQE3 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
TUBA1CQ9BQE3 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TUBA1CQ9BQE3 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
TUBA1CQ9BQE3 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC19.83■□□□□ 0.77
TUBA1CQ9BQE3 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC19.83■□□□□ 0.77
TUBA1CQ9BQE3 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TUBA1CQ9BQE3 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
TUBA1CQ9BQE3 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC19.83■□□□□ 0.76
TUBA1CQ9BQE3 LINC01006-201ENST00000333319 2292 ntBASIC19.83■□□□□ 0.76
TUBA1CQ9BQE3 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
TUBA1CQ9BQE3 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
TUBA1CQ9BQE3 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC19.83■□□□□ 0.76
TUBA1CQ9BQE3 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TUBA1CQ9BQE3 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.76
TUBA1CQ9BQE3 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
TUBA1CQ9BQE3 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
TUBA1CQ9BQE3 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TUBA1CQ9BQE3 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
TUBA1CQ9BQE3 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC19.83■□□□□ 0.76
TUBA1CQ9BQE3 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
TUBA1CQ9BQE3 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TUBA1CQ9BQE3 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TUBA1CQ9BQE3 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TUBA1CQ9BQE3 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TUBA1CQ9BQE3 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC19.82■□□□□ 0.76
TUBA1CQ9BQE3 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
TUBA1CQ9BQE3 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
TUBA1CQ9BQE3 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TUBA1CQ9BQE3 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TUBA1CQ9BQE3 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms