Protein–RNA interactions for Protein: Q96TA0

PCDHB18P, Putative protocadherin beta-18, humanhuman

Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB18PQ96TA0 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PCDHB18PQ96TA0 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PCDHB18PQ96TA0 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
PCDHB18PQ96TA0 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PCDHB18PQ96TA0 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PCDHB18PQ96TA0 MIR638-201ENST00000385237 100 ntBASIC22.46■■□□□ 1.19
PCDHB18PQ96TA0 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
PCDHB18PQ96TA0 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PCDHB18PQ96TA0 MPST-204ENST00000404393 1329 ntTSL 5 BASIC22.46■■□□□ 1.19
PCDHB18PQ96TA0 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC22.46■■□□□ 1.19
PCDHB18PQ96TA0 PALM-207ENST00000590161 2137 ntTSL 4 BASIC22.46■■□□□ 1.19
PCDHB18PQ96TA0 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
PCDHB18PQ96TA0 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
PCDHB18PQ96TA0 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
PCDHB18PQ96TA0 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PCDHB18PQ96TA0 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
PCDHB18PQ96TA0 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
PCDHB18PQ96TA0 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
PCDHB18PQ96TA0 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
PCDHB18PQ96TA0 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC22.45■■□□□ 1.18
PCDHB18PQ96TA0 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PCDHB18PQ96TA0 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC22.45■■□□□ 1.18
PCDHB18PQ96TA0 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC22.45■■□□□ 1.18
PCDHB18PQ96TA0 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC22.45■■□□□ 1.18
PCDHB18PQ96TA0 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC22.45■■□□□ 1.18
PCDHB18PQ96TA0 TPRG1LP1-201ENST00000598702 760 ntBASIC22.45■■□□□ 1.18
PCDHB18PQ96TA0 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC22.45■■□□□ 1.18
PCDHB18PQ96TA0 MIR6084-201ENST00000622012 110 ntBASIC22.45■■□□□ 1.18
PCDHB18PQ96TA0 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
PCDHB18PQ96TA0 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PCDHB18PQ96TA0 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PCDHB18PQ96TA0 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
PCDHB18PQ96TA0 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
PCDHB18PQ96TA0 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC22.44■■□□□ 1.18
PCDHB18PQ96TA0 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
PCDHB18PQ96TA0 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC22.44■■□□□ 1.18
PCDHB18PQ96TA0 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
PCDHB18PQ96TA0 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC22.44■■□□□ 1.18
PCDHB18PQ96TA0 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
PCDHB18PQ96TA0 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC22.44■■□□□ 1.18
PCDHB18PQ96TA0 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC22.44■■□□□ 1.18
PCDHB18PQ96TA0 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC22.44■■□□□ 1.18
PCDHB18PQ96TA0 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC22.44■■□□□ 1.18
PCDHB18PQ96TA0 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC22.43■■□□□ 1.18
PCDHB18PQ96TA0 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PCDHB18PQ96TA0 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC22.43■■□□□ 1.18
PCDHB18PQ96TA0 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC22.43■■□□□ 1.18
PCDHB18PQ96TA0 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC22.43■■□□□ 1.18
PCDHB18PQ96TA0 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
PCDHB18PQ96TA0 AL049796.1-201ENST00000565336 1766 ntBASIC22.43■■□□□ 1.18
PCDHB18PQ96TA0 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PCDHB18PQ96TA0 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC22.43■■□□□ 1.18
PCDHB18PQ96TA0 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC22.43■■□□□ 1.18
PCDHB18PQ96TA0 AC105265.2-201ENST00000467189 838 ntBASIC22.43■■□□□ 1.18
PCDHB18PQ96TA0 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
PCDHB18PQ96TA0 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
PCDHB18PQ96TA0 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC22.43■■□□□ 1.18
PCDHB18PQ96TA0 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
PCDHB18PQ96TA0 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
PCDHB18PQ96TA0 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
PCDHB18PQ96TA0 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC22.42■■□□□ 1.18
PCDHB18PQ96TA0 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
PCDHB18PQ96TA0 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC22.42■■□□□ 1.18
PCDHB18PQ96TA0 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC22.42■■□□□ 1.18
PCDHB18PQ96TA0 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC22.42■■□□□ 1.18
PCDHB18PQ96TA0 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC22.42■■□□□ 1.18
PCDHB18PQ96TA0 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
PCDHB18PQ96TA0 STX5-203ENST00000394690 1568 ntTSL 5 BASIC22.42■■□□□ 1.18
PCDHB18PQ96TA0 PARN-205ENST00000539279 1557 ntTSL 2 BASIC22.42■■□□□ 1.18
PCDHB18PQ96TA0 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
PCDHB18PQ96TA0 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
PCDHB18PQ96TA0 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC22.41■■□□□ 1.18
PCDHB18PQ96TA0 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
PCDHB18PQ96TA0 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
PCDHB18PQ96TA0 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
PCDHB18PQ96TA0 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC22.41■■□□□ 1.18
PCDHB18PQ96TA0 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
PCDHB18PQ96TA0 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC22.41■■□□□ 1.18
PCDHB18PQ96TA0 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
PCDHB18PQ96TA0 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC22.41■■□□□ 1.18
PCDHB18PQ96TA0 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
PCDHB18PQ96TA0 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
PCDHB18PQ96TA0 NT5C3AP1-201ENST00000394500 1012 ntBASIC22.41■■□□□ 1.18
PCDHB18PQ96TA0 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC22.41■■□□□ 1.18
PCDHB18PQ96TA0 AL354811.1-201ENST00000610286 706 ntBASIC22.41■■□□□ 1.18
PCDHB18PQ96TA0 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
PCDHB18PQ96TA0 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC22.41■■□□□ 1.18
PCDHB18PQ96TA0 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
PCDHB18PQ96TA0 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
PCDHB18PQ96TA0 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC22.4■■□□□ 1.18
PCDHB18PQ96TA0 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PCDHB18PQ96TA0 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
PCDHB18PQ96TA0 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
PCDHB18PQ96TA0 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PCDHB18PQ96TA0 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
PCDHB18PQ96TA0 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
PCDHB18PQ96TA0 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.18
PCDHB18PQ96TA0 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.18
PCDHB18PQ96TA0 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
PCDHB18PQ96TA0 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms