Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PDLIM5Q96HC4 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PDLIM5Q96HC4 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PDLIM5Q96HC4 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
PDLIM5Q96HC4 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PDLIM5Q96HC4 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PDLIM5Q96HC4 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.71■□□□□ 0.91
PDLIM5Q96HC4 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PDLIM5Q96HC4 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC20.71■□□□□ 0.91
PDLIM5Q96HC4 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC20.71■□□□□ 0.91
PDLIM5Q96HC4 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PDLIM5Q96HC4 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PDLIM5Q96HC4 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.71■□□□□ 0.91
PDLIM5Q96HC4 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PDLIM5Q96HC4 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC20.71■□□□□ 0.91
PDLIM5Q96HC4 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PDLIM5Q96HC4 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PDLIM5Q96HC4 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.91
PDLIM5Q96HC4 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
PDLIM5Q96HC4 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
PDLIM5Q96HC4 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.7■□□□□ 0.9
PDLIM5Q96HC4 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.7■□□□□ 0.9
PDLIM5Q96HC4 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
PDLIM5Q96HC4 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.7■□□□□ 0.9
PDLIM5Q96HC4 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PDLIM5Q96HC4 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC20.7■□□□□ 0.9
PDLIM5Q96HC4 NT5C3AP1-201ENST00000394500 1012 ntBASIC20.7■□□□□ 0.9
PDLIM5Q96HC4 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PDLIM5Q96HC4 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PDLIM5Q96HC4 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PDLIM5Q96HC4 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PDLIM5Q96HC4 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PDLIM5Q96HC4 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PDLIM5Q96HC4 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
PDLIM5Q96HC4 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC20.69■□□□□ 0.9
PDLIM5Q96HC4 AF106564.1-201ENST00000607058 2553 ntBASIC20.69■□□□□ 0.9
PDLIM5Q96HC4 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC20.69■□□□□ 0.9
PDLIM5Q96HC4 MTURN-203ENST00000409688 843 ntTSL 2 BASIC20.69■□□□□ 0.9
PDLIM5Q96HC4 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.69■□□□□ 0.9
PDLIM5Q96HC4 STOX2-205ENST00000513034 807 ntTSL 3 BASIC20.69■□□□□ 0.9
PDLIM5Q96HC4 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.69■□□□□ 0.9
PDLIM5Q96HC4 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC20.69■□□□□ 0.9
PDLIM5Q96HC4 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
PDLIM5Q96HC4 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PDLIM5Q96HC4 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
PDLIM5Q96HC4 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.69■□□□□ 0.9
PDLIM5Q96HC4 AL049796.1-201ENST00000565336 1766 ntBASIC20.69■□□□□ 0.9
PDLIM5Q96HC4 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.69■□□□□ 0.9
PDLIM5Q96HC4 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PDLIM5Q96HC4 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
PDLIM5Q96HC4 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PDLIM5Q96HC4 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC20.68■□□□□ 0.9
PDLIM5Q96HC4 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
PDLIM5Q96HC4 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PDLIM5Q96HC4 AC105265.2-201ENST00000467189 838 ntBASIC20.68■□□□□ 0.9
PDLIM5Q96HC4 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC20.68■□□□□ 0.9
PDLIM5Q96HC4 EEF1DP3-203ENST00000566025 782 ntBASIC20.68■□□□□ 0.9
PDLIM5Q96HC4 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PDLIM5Q96HC4 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PDLIM5Q96HC4 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.68■□□□□ 0.9
PDLIM5Q96HC4 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PDLIM5Q96HC4 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PDLIM5Q96HC4 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PDLIM5Q96HC4 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.67■□□□□ 0.9
PDLIM5Q96HC4 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.67■□□□□ 0.9
PDLIM5Q96HC4 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PDLIM5Q96HC4 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
PDLIM5Q96HC4 NME4-202ENST00000382940 766 ntTSL 3 BASIC20.67■□□□□ 0.9
PDLIM5Q96HC4 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
PDLIM5Q96HC4 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PDLIM5Q96HC4 AC053503.5-201ENST00000601508 636 ntBASIC20.67■□□□□ 0.9
PDLIM5Q96HC4 NME4-211ENST00000620944 1193 ntTSL 2 BASIC20.67■□□□□ 0.9
PDLIM5Q96HC4 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC20.67■□□□□ 0.9
PDLIM5Q96HC4 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PDLIM5Q96HC4 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PDLIM5Q96HC4 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20.67■□□□□ 0.9
PDLIM5Q96HC4 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
PDLIM5Q96HC4 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.67■□□□□ 0.9
PDLIM5Q96HC4 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
PDLIM5Q96HC4 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PDLIM5Q96HC4 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PDLIM5Q96HC4 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PDLIM5Q96HC4 AC027612.3-201ENST00000413684 1047 ntBASIC20.66■□□□□ 0.9
PDLIM5Q96HC4 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC20.66■□□□□ 0.9
PDLIM5Q96HC4 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
PDLIM5Q96HC4 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20.66■□□□□ 0.9
PDLIM5Q96HC4 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PDLIM5Q96HC4 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PDLIM5Q96HC4 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
PDLIM5Q96HC4 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
PDLIM5Q96HC4 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC20.65■□□□□ 0.9
PDLIM5Q96HC4 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.65■□□□□ 0.9
PDLIM5Q96HC4 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PDLIM5Q96HC4 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PDLIM5Q96HC4 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PDLIM5Q96HC4 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.65■□□□□ 0.9
PDLIM5Q96HC4 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC20.65■□□□□ 0.9
PDLIM5Q96HC4 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC20.65■□□□□ 0.9
PDLIM5Q96HC4 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
PDLIM5Q96HC4 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms