Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
CPNE4Q96A23 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
CPNE4Q96A23 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CPNE4Q96A23 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
CPNE4Q96A23 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CPNE4Q96A23 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CPNE4Q96A23 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC18.97■□□□□ 0.63
CPNE4Q96A23 AC026471.6-201ENST00000622954 1905 ntBASIC18.97■□□□□ 0.63
CPNE4Q96A23 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CPNE4Q96A23 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CPNE4Q96A23 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CPNE4Q96A23 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CPNE4Q96A23 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
CPNE4Q96A23 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CPNE4Q96A23 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CPNE4Q96A23 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CPNE4Q96A23 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC18.96■□□□□ 0.63
CPNE4Q96A23 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC18.96■□□□□ 0.63
CPNE4Q96A23 AC022517.1-201ENST00000592429 346 ntBASIC18.96■□□□□ 0.63
CPNE4Q96A23 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CPNE4Q96A23 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
CPNE4Q96A23 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CPNE4Q96A23 GOLGA2P6-201ENST00000340929 2049 ntBASIC18.95■□□□□ 0.62
CPNE4Q96A23 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CPNE4Q96A23 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CPNE4Q96A23 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CPNE4Q96A23 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
CPNE4Q96A23 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC18.95■□□□□ 0.62
CPNE4Q96A23 RNF146-206ENST00000480444 843 ntTSL 2 BASIC18.95■□□□□ 0.62
CPNE4Q96A23 AC137761.2-201ENST00000561729 223 ntBASIC18.95■□□□□ 0.62
CPNE4Q96A23 AC145350.3-201ENST00000569033 163 ntBASIC18.95■□□□□ 0.62
CPNE4Q96A23 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC18.95■□□□□ 0.62
CPNE4Q96A23 AC010542.4-201ENST00000563151 1910 ntBASIC18.95■□□□□ 0.62
CPNE4Q96A23 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CPNE4Q96A23 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CPNE4Q96A23 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CPNE4Q96A23 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CPNE4Q96A23 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CPNE4Q96A23 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC18.95■□□□□ 0.62
CPNE4Q96A23 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CPNE4Q96A23 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CPNE4Q96A23 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC18.94■□□□□ 0.62
CPNE4Q96A23 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC18.94■□□□□ 0.62
CPNE4Q96A23 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC18.94■□□□□ 0.62
CPNE4Q96A23 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
CPNE4Q96A23 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CPNE4Q96A23 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC18.94■□□□□ 0.62
CPNE4Q96A23 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CPNE4Q96A23 AC016769.1-201ENST00000409132 1010 ntBASIC18.94■□□□□ 0.62
CPNE4Q96A23 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CPNE4Q96A23 AC010141.2-201ENST00000452426 721 ntBASIC18.94■□□□□ 0.62
CPNE4Q96A23 DBI-210ENST00000542275 757 ntTSL 5 BASIC18.94■□□□□ 0.62
CPNE4Q96A23 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC18.94■□□□□ 0.62
CPNE4Q96A23 AP001160.3-201ENST00000601484 763 ntBASIC18.94■□□□□ 0.62
CPNE4Q96A23 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CPNE4Q96A23 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CPNE4Q96A23 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CPNE4Q96A23 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CPNE4Q96A23 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
CPNE4Q96A23 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC18.93■□□□□ 0.62
CPNE4Q96A23 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC18.93■□□□□ 0.62
CPNE4Q96A23 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC18.93■□□□□ 0.62
CPNE4Q96A23 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CPNE4Q96A23 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CPNE4Q96A23 KRT18P11-201ENST00000435214 1283 ntBASIC18.93■□□□□ 0.62
CPNE4Q96A23 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC18.93■□□□□ 0.62
CPNE4Q96A23 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC18.93■□□□□ 0.62
CPNE4Q96A23 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC18.93■□□□□ 0.62
CPNE4Q96A23 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.93■□□□□ 0.62
CPNE4Q96A23 AC008175.2-201ENST00000612840 297 ntBASIC18.93■□□□□ 0.62
CPNE4Q96A23 AC092666.2-201ENST00000613287 246 ntBASIC18.93■□□□□ 0.62
CPNE4Q96A23 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CPNE4Q96A23 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CPNE4Q96A23 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
CPNE4Q96A23 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
CPNE4Q96A23 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CPNE4Q96A23 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CPNE4Q96A23 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CPNE4Q96A23 STX7-201ENST00000367937 1090 ntTSL 5 BASIC18.92■□□□□ 0.62
CPNE4Q96A23 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC18.92■□□□□ 0.62
CPNE4Q96A23 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC18.92■□□□□ 0.62
CPNE4Q96A23 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC18.92■□□□□ 0.62
CPNE4Q96A23 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC18.92■□□□□ 0.62
CPNE4Q96A23 KRT18P20-201ENST00000548986 1279 ntBASIC18.92■□□□□ 0.62
CPNE4Q96A23 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CPNE4Q96A23 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC18.92■□□□□ 0.62
CPNE4Q96A23 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CPNE4Q96A23 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CPNE4Q96A23 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC18.92■□□□□ 0.62
CPNE4Q96A23 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CPNE4Q96A23 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CPNE4Q96A23 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
CPNE4Q96A23 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CPNE4Q96A23 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC18.92■□□□□ 0.62
CPNE4Q96A23 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
CPNE4Q96A23 RARG-204ENST00000543726 1779 ntTSL 2 BASIC18.91■□□□□ 0.62
CPNE4Q96A23 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CPNE4Q96A23 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
CPNE4Q96A23 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
CPNE4Q96A23 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms