Protein–RNA interactions for Protein: Q8WWA1

TMEM40, Transmembrane protein 40, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM40Q8WWA1 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
TMEM40Q8WWA1 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
TMEM40Q8WWA1 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
TMEM40Q8WWA1 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC23.13■■□□□ 1.29
TMEM40Q8WWA1 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
TMEM40Q8WWA1 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
TMEM40Q8WWA1 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
TMEM40Q8WWA1 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
TMEM40Q8WWA1 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC23.13■■□□□ 1.29
TMEM40Q8WWA1 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
TMEM40Q8WWA1 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC23.13■■□□□ 1.29
TMEM40Q8WWA1 AC016405.3-201ENST00000607710 860 ntBASIC23.13■■□□□ 1.29
TMEM40Q8WWA1 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC23.13■■□□□ 1.29
TMEM40Q8WWA1 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC23.13■■□□□ 1.29
TMEM40Q8WWA1 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC23.13■■□□□ 1.29
TMEM40Q8WWA1 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
TMEM40Q8WWA1 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC23.13■■□□□ 1.29
TMEM40Q8WWA1 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
TMEM40Q8WWA1 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
TMEM40Q8WWA1 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC23.12■■□□□ 1.29
TMEM40Q8WWA1 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
TMEM40Q8WWA1 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC23.12■■□□□ 1.29
TMEM40Q8WWA1 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC23.12■■□□□ 1.29
TMEM40Q8WWA1 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
TMEM40Q8WWA1 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
TMEM40Q8WWA1 AC073210.2-201ENST00000430369 194 ntBASIC23.12■■□□□ 1.29
TMEM40Q8WWA1 TSPY20P-201ENST00000450910 630 ntBASIC23.12■■□□□ 1.29
TMEM40Q8WWA1 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
TMEM40Q8WWA1 PHB2-213ENST00000546111 858 ntTSL 2 BASIC23.12■■□□□ 1.29
TMEM40Q8WWA1 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
TMEM40Q8WWA1 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
TMEM40Q8WWA1 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC23.12■■□□□ 1.29
TMEM40Q8WWA1 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
TMEM40Q8WWA1 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
TMEM40Q8WWA1 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
TMEM40Q8WWA1 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC23.12■■□□□ 1.29
TMEM40Q8WWA1 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC23.12■■□□□ 1.29
TMEM40Q8WWA1 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
TMEM40Q8WWA1 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
TMEM40Q8WWA1 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
TMEM40Q8WWA1 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC23.11■■□□□ 1.29
TMEM40Q8WWA1 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
TMEM40Q8WWA1 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
TMEM40Q8WWA1 BET1L-204ENST00000410108 637 ntTSL 3 BASIC23.11■■□□□ 1.29
TMEM40Q8WWA1 MIPEPP3-201ENST00000412105 444 ntBASIC23.11■■□□□ 1.29
TMEM40Q8WWA1 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
TMEM40Q8WWA1 RGMA-211ENST00000557420 989 ntTSL 3 BASIC23.11■■□□□ 1.29
TMEM40Q8WWA1 MIR4651-201ENST00000582622 73 ntBASIC23.11■■□□□ 1.29
TMEM40Q8WWA1 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC23.11■■□□□ 1.29
TMEM40Q8WWA1 OR10C1-204ENST00000622521 1039 ntBASIC23.11■■□□□ 1.29
TMEM40Q8WWA1 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
TMEM40Q8WWA1 AC133041.1-202ENST00000642053 222 ntBASIC23.11■■□□□ 1.29
TMEM40Q8WWA1 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC23.11■■□□□ 1.29
TMEM40Q8WWA1 AC010542.4-201ENST00000563151 1910 ntBASIC23.11■■□□□ 1.29
TMEM40Q8WWA1 MKRN4P-201ENST00000444706 1521 ntBASIC23.11■■□□□ 1.29
TMEM40Q8WWA1 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
TMEM40Q8WWA1 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
TMEM40Q8WWA1 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
TMEM40Q8WWA1 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC23.1■■□□□ 1.29
TMEM40Q8WWA1 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
TMEM40Q8WWA1 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
TMEM40Q8WWA1 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC23.1■■□□□ 1.29
TMEM40Q8WWA1 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC23.1■■□□□ 1.29
TMEM40Q8WWA1 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC23.1■■□□□ 1.29
TMEM40Q8WWA1 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
TMEM40Q8WWA1 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC23.1■■□□□ 1.29
TMEM40Q8WWA1 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC23.1■■□□□ 1.29
TMEM40Q8WWA1 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC23.1■■□□□ 1.29
TMEM40Q8WWA1 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
TMEM40Q8WWA1 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC23.1■■□□□ 1.29
TMEM40Q8WWA1 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC23.1■■□□□ 1.29
TMEM40Q8WWA1 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC23.1■■□□□ 1.29
TMEM40Q8WWA1 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC23.1■■□□□ 1.29
TMEM40Q8WWA1 TERT-206ENST00000508104 2486 ntTSL 5 BASIC23.09■■□□□ 1.29
TMEM40Q8WWA1 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
TMEM40Q8WWA1 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
TMEM40Q8WWA1 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
TMEM40Q8WWA1 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC23.09■■□□□ 1.29
TMEM40Q8WWA1 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
TMEM40Q8WWA1 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC23.09■■□□□ 1.29
TMEM40Q8WWA1 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
TMEM40Q8WWA1 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
TMEM40Q8WWA1 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC23.09■■□□□ 1.29
TMEM40Q8WWA1 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC23.09■■□□□ 1.29
TMEM40Q8WWA1 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
TMEM40Q8WWA1 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
TMEM40Q8WWA1 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
TMEM40Q8WWA1 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC23.08■■□□□ 1.29
TMEM40Q8WWA1 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
TMEM40Q8WWA1 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.29
TMEM40Q8WWA1 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
TMEM40Q8WWA1 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
TMEM40Q8WWA1 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
TMEM40Q8WWA1 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
TMEM40Q8WWA1 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC23.08■■□□□ 1.29
TMEM40Q8WWA1 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
TMEM40Q8WWA1 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC23.08■■□□□ 1.28
TMEM40Q8WWA1 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
TMEM40Q8WWA1 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
TMEM40Q8WWA1 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC23.07■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms