Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
SNIP1Q8TAD8 THRA-202ENST00000394121 2260 ntTSL 2 BASIC19.99■□□□□ 0.79
SNIP1Q8TAD8 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SNIP1Q8TAD8 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
SNIP1Q8TAD8 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SNIP1Q8TAD8 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SNIP1Q8TAD8 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SNIP1Q8TAD8 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
SNIP1Q8TAD8 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC19.99■□□□□ 0.79
SNIP1Q8TAD8 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC19.99■□□□□ 0.79
SNIP1Q8TAD8 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC19.99■□□□□ 0.79
SNIP1Q8TAD8 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.99■□□□□ 0.79
SNIP1Q8TAD8 AC008175.2-201ENST00000612840 297 ntBASIC19.99■□□□□ 0.79
SNIP1Q8TAD8 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC19.99■□□□□ 0.79
SNIP1Q8TAD8 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SNIP1Q8TAD8 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
SNIP1Q8TAD8 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
SNIP1Q8TAD8 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC19.98■□□□□ 0.79
SNIP1Q8TAD8 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
SNIP1Q8TAD8 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SNIP1Q8TAD8 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SNIP1Q8TAD8 ECEL1P3-201ENST00000427961 737 ntBASIC19.98■□□□□ 0.79
SNIP1Q8TAD8 OR2A1-AS1-201ENST00000462305 773 ntBASIC19.98■□□□□ 0.79
SNIP1Q8TAD8 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC19.98■□□□□ 0.79
SNIP1Q8TAD8 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC19.98■□□□□ 0.79
SNIP1Q8TAD8 CBFB-203ENST00000561924 584 ntTSL 5 BASIC19.98■□□□□ 0.79
SNIP1Q8TAD8 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SNIP1Q8TAD8 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SNIP1Q8TAD8 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.98■□□□□ 0.79
SNIP1Q8TAD8 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SNIP1Q8TAD8 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC19.98■□□□□ 0.79
SNIP1Q8TAD8 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SNIP1Q8TAD8 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
SNIP1Q8TAD8 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC19.98■□□□□ 0.79
SNIP1Q8TAD8 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
SNIP1Q8TAD8 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.97■□□□□ 0.79
SNIP1Q8TAD8 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SNIP1Q8TAD8 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC19.97■□□□□ 0.79
SNIP1Q8TAD8 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SNIP1Q8TAD8 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SNIP1Q8TAD8 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
SNIP1Q8TAD8 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
SNIP1Q8TAD8 PBX1-209ENST00000485769 834 ntTSL 2 BASIC19.97■□□□□ 0.79
SNIP1Q8TAD8 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC19.97■□□□□ 0.79
SNIP1Q8TAD8 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC19.97■□□□□ 0.79
SNIP1Q8TAD8 RNF121-214ENST00000533380 870 ntTSL 3 BASIC19.97■□□□□ 0.79
SNIP1Q8TAD8 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
SNIP1Q8TAD8 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SNIP1Q8TAD8 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SNIP1Q8TAD8 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SNIP1Q8TAD8 AL139125.2-201ENST00000623134 1869 ntBASIC19.96■□□□□ 0.79
SNIP1Q8TAD8 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SNIP1Q8TAD8 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
SNIP1Q8TAD8 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SNIP1Q8TAD8 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SNIP1Q8TAD8 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SNIP1Q8TAD8 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC19.96■□□□□ 0.79
SNIP1Q8TAD8 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SNIP1Q8TAD8 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SNIP1Q8TAD8 GXYLT1P3-201ENST00000453058 1193 ntBASIC19.96■□□□□ 0.79
SNIP1Q8TAD8 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC19.96■□□□□ 0.79
SNIP1Q8TAD8 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC19.96■□□□□ 0.79
SNIP1Q8TAD8 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC19.96■□□□□ 0.79
SNIP1Q8TAD8 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC19.96■□□□□ 0.79
SNIP1Q8TAD8 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC19.96■□□□□ 0.79
SNIP1Q8TAD8 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
SNIP1Q8TAD8 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SNIP1Q8TAD8 H19-210ENST00000439725 1929 ntTSL 2 BASIC19.96■□□□□ 0.79
SNIP1Q8TAD8 AC012676.1-201ENST00000574705 1949 ntBASIC19.96■□□□□ 0.79
SNIP1Q8TAD8 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SNIP1Q8TAD8 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
SNIP1Q8TAD8 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC19.95■□□□□ 0.78
SNIP1Q8TAD8 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
SNIP1Q8TAD8 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SNIP1Q8TAD8 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
SNIP1Q8TAD8 POU5F1P4-201ENST00000413175 1085 ntBASIC19.95■□□□□ 0.78
SNIP1Q8TAD8 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC19.95■□□□□ 0.78
SNIP1Q8TAD8 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC19.95■□□□□ 0.78
SNIP1Q8TAD8 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
SNIP1Q8TAD8 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC19.95■□□□□ 0.78
SNIP1Q8TAD8 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SNIP1Q8TAD8 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SNIP1Q8TAD8 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SNIP1Q8TAD8 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SNIP1Q8TAD8 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
SNIP1Q8TAD8 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
SNIP1Q8TAD8 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SNIP1Q8TAD8 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SNIP1Q8TAD8 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC19.94■□□□□ 0.78
SNIP1Q8TAD8 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC19.94■□□□□ 0.78
SNIP1Q8TAD8 LSM12P1-201ENST00000411836 588 ntBASIC19.94■□□□□ 0.78
SNIP1Q8TAD8 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SNIP1Q8TAD8 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC19.94■□□□□ 0.78
SNIP1Q8TAD8 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC19.94■□□□□ 0.78
SNIP1Q8TAD8 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC19.94■□□□□ 0.78
SNIP1Q8TAD8 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
SNIP1Q8TAD8 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC19.94■□□□□ 0.78
SNIP1Q8TAD8 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SNIP1Q8TAD8 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC19.94■□□□□ 0.78
SNIP1Q8TAD8 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms