Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
DNAAF1Q8NEP3 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC18.53■□□□□ 0.56
DNAAF1Q8NEP3 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
DNAAF1Q8NEP3 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
DNAAF1Q8NEP3 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC18.53■□□□□ 0.56
DNAAF1Q8NEP3 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
DNAAF1Q8NEP3 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC18.53■□□□□ 0.56
DNAAF1Q8NEP3 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
DNAAF1Q8NEP3 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
DNAAF1Q8NEP3 RBM38-205ENST00000440234 686 ntTSL 2 BASIC18.53■□□□□ 0.56
DNAAF1Q8NEP3 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC18.53■□□□□ 0.56
DNAAF1Q8NEP3 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
DNAAF1Q8NEP3 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC18.53■□□□□ 0.56
DNAAF1Q8NEP3 AC104564.3-201ENST00000582367 638 ntBASIC18.53■□□□□ 0.56
DNAAF1Q8NEP3 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
DNAAF1Q8NEP3 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
DNAAF1Q8NEP3 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC18.53■□□□□ 0.56
DNAAF1Q8NEP3 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
DNAAF1Q8NEP3 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
DNAAF1Q8NEP3 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
DNAAF1Q8NEP3 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC18.52■□□□□ 0.56
DNAAF1Q8NEP3 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
DNAAF1Q8NEP3 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
DNAAF1Q8NEP3 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
DNAAF1Q8NEP3 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
DNAAF1Q8NEP3 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC18.52■□□□□ 0.56
DNAAF1Q8NEP3 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
DNAAF1Q8NEP3 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
DNAAF1Q8NEP3 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
DNAAF1Q8NEP3 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC18.52■□□□□ 0.56
DNAAF1Q8NEP3 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC18.52■□□□□ 0.56
DNAAF1Q8NEP3 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC18.52■□□□□ 0.56
DNAAF1Q8NEP3 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC18.52■□□□□ 0.56
DNAAF1Q8NEP3 AL138724.1-201ENST00000606771 1088 ntBASIC18.52■□□□□ 0.56
DNAAF1Q8NEP3 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
DNAAF1Q8NEP3 AC087239.1-201ENST00000622671 572 ntBASIC18.52■□□□□ 0.56
DNAAF1Q8NEP3 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
DNAAF1Q8NEP3 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
DNAAF1Q8NEP3 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC18.52■□□□□ 0.55
DNAAF1Q8NEP3 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
DNAAF1Q8NEP3 LINC01006-201ENST00000333319 2292 ntBASIC18.52■□□□□ 0.55
DNAAF1Q8NEP3 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
DNAAF1Q8NEP3 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
DNAAF1Q8NEP3 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
DNAAF1Q8NEP3 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.51■□□□□ 0.55
DNAAF1Q8NEP3 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
DNAAF1Q8NEP3 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.51■□□□□ 0.55
DNAAF1Q8NEP3 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
DNAAF1Q8NEP3 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC18.51■□□□□ 0.55
DNAAF1Q8NEP3 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
DNAAF1Q8NEP3 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
DNAAF1Q8NEP3 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC18.51■□□□□ 0.55
DNAAF1Q8NEP3 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
DNAAF1Q8NEP3 AL356441.2-201ENST00000443009 864 ntBASIC18.51■□□□□ 0.55
DNAAF1Q8NEP3 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC18.51■□□□□ 0.55
DNAAF1Q8NEP3 DUX4L19-201ENST00000557448 1267 ntBASIC18.51■□□□□ 0.55
DNAAF1Q8NEP3 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC18.51■□□□□ 0.55
DNAAF1Q8NEP3 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
DNAAF1Q8NEP3 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
DNAAF1Q8NEP3 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
DNAAF1Q8NEP3 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
DNAAF1Q8NEP3 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
DNAAF1Q8NEP3 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
DNAAF1Q8NEP3 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
DNAAF1Q8NEP3 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
DNAAF1Q8NEP3 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
DNAAF1Q8NEP3 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
DNAAF1Q8NEP3 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC18.5■□□□□ 0.55
DNAAF1Q8NEP3 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC18.5■□□□□ 0.55
DNAAF1Q8NEP3 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
DNAAF1Q8NEP3 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
DNAAF1Q8NEP3 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
DNAAF1Q8NEP3 SRR-208ENST00000576848 588 ntTSL 4 BASIC18.5■□□□□ 0.55
DNAAF1Q8NEP3 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC18.5■□□□□ 0.55
DNAAF1Q8NEP3 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC18.5■□□□□ 0.55
DNAAF1Q8NEP3 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
DNAAF1Q8NEP3 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC18.5■□□□□ 0.55
DNAAF1Q8NEP3 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
DNAAF1Q8NEP3 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
DNAAF1Q8NEP3 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
DNAAF1Q8NEP3 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC18.49■□□□□ 0.55
DNAAF1Q8NEP3 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
DNAAF1Q8NEP3 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC18.49■□□□□ 0.55
DNAAF1Q8NEP3 RPP21-222ENST00000433076 577 ntTSL 2 BASIC18.49■□□□□ 0.55
DNAAF1Q8NEP3 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
DNAAF1Q8NEP3 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC18.49■□□□□ 0.55
DNAAF1Q8NEP3 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
DNAAF1Q8NEP3 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
DNAAF1Q8NEP3 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
DNAAF1Q8NEP3 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
DNAAF1Q8NEP3 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
DNAAF1Q8NEP3 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC18.49■□□□□ 0.55
DNAAF1Q8NEP3 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
DNAAF1Q8NEP3 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
DNAAF1Q8NEP3 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
DNAAF1Q8NEP3 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
DNAAF1Q8NEP3 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC18.48■□□□□ 0.55
DNAAF1Q8NEP3 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC18.48■□□□□ 0.55
DNAAF1Q8NEP3 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
DNAAF1Q8NEP3 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms