Protein–RNA interactions for Protein: Q8N7P3

CLDN22, Claudin-22, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN22Q8N7P3 AL049796.1-201ENST00000565336 1766 ntBASIC19.24■□□□□ 0.67
CLDN22Q8N7P3 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
CLDN22Q8N7P3 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLDN22Q8N7P3 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC19.23■□□□□ 0.67
CLDN22Q8N7P3 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLDN22Q8N7P3 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLDN22Q8N7P3 UNC93B3-201ENST00000308076 687 ntBASIC19.23■□□□□ 0.67
CLDN22Q8N7P3 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
CLDN22Q8N7P3 PTMA-205ENST00000410064 814 ntTSL 2 BASIC19.23■□□□□ 0.67
CLDN22Q8N7P3 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CLDN22Q8N7P3 SF1-220ENST00000626028 704 ntTSL 2 BASIC19.23■□□□□ 0.67
CLDN22Q8N7P3 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CLDN22Q8N7P3 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLDN22Q8N7P3 AC003102.1-202ENST00000563394 1796 ntBASIC19.23■□□□□ 0.67
CLDN22Q8N7P3 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLDN22Q8N7P3 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLDN22Q8N7P3 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.23■□□□□ 0.67
CLDN22Q8N7P3 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CLDN22Q8N7P3 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CLDN22Q8N7P3 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLDN22Q8N7P3 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLDN22Q8N7P3 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLDN22Q8N7P3 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CLDN22Q8N7P3 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
CLDN22Q8N7P3 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
CLDN22Q8N7P3 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLDN22Q8N7P3 AP004607.7-201ENST00000527152 1677 ntBASIC19.22■□□□□ 0.67
CLDN22Q8N7P3 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLDN22Q8N7P3 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC19.22■□□□□ 0.67
CLDN22Q8N7P3 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLDN22Q8N7P3 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLDN22Q8N7P3 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.22■□□□□ 0.67
CLDN22Q8N7P3 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.21■□□□□ 0.67
CLDN22Q8N7P3 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
CLDN22Q8N7P3 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLDN22Q8N7P3 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
CLDN22Q8N7P3 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19.21■□□□□ 0.67
CLDN22Q8N7P3 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLDN22Q8N7P3 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC19.21■□□□□ 0.67
CLDN22Q8N7P3 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.21■□□□□ 0.67
CLDN22Q8N7P3 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.21■□□□□ 0.67
CLDN22Q8N7P3 MIR4767-201ENST00000582827 78 ntBASIC19.21■□□□□ 0.67
CLDN22Q8N7P3 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLDN22Q8N7P3 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLDN22Q8N7P3 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLDN22Q8N7P3 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC19.21■□□□□ 0.67
CLDN22Q8N7P3 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLDN22Q8N7P3 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.2■□□□□ 0.66
CLDN22Q8N7P3 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CLDN22Q8N7P3 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC19.2■□□□□ 0.66
CLDN22Q8N7P3 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLDN22Q8N7P3 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLDN22Q8N7P3 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLDN22Q8N7P3 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
CLDN22Q8N7P3 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.2■□□□□ 0.66
CLDN22Q8N7P3 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLDN22Q8N7P3 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLDN22Q8N7P3 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLDN22Q8N7P3 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLDN22Q8N7P3 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLDN22Q8N7P3 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLDN22Q8N7P3 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CLDN22Q8N7P3 SNX3-202ENST00000349379 890 ntTSL 2 BASIC19.19■□□□□ 0.66
CLDN22Q8N7P3 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CLDN22Q8N7P3 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
CLDN22Q8N7P3 AC024257.2-201ENST00000549699 147 ntBASIC19.19■□□□□ 0.66
CLDN22Q8N7P3 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLDN22Q8N7P3 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLDN22Q8N7P3 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLDN22Q8N7P3 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.19■□□□□ 0.66
CLDN22Q8N7P3 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLDN22Q8N7P3 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
CLDN22Q8N7P3 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLDN22Q8N7P3 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CLDN22Q8N7P3 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CLDN22Q8N7P3 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
CLDN22Q8N7P3 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLDN22Q8N7P3 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLDN22Q8N7P3 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.18■□□□□ 0.66
CLDN22Q8N7P3 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CLDN22Q8N7P3 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.18■□□□□ 0.66
CLDN22Q8N7P3 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CLDN22Q8N7P3 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
CLDN22Q8N7P3 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CLDN22Q8N7P3 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC19.18■□□□□ 0.66
CLDN22Q8N7P3 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC19.18■□□□□ 0.66
CLDN22Q8N7P3 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLDN22Q8N7P3 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLDN22Q8N7P3 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLDN22Q8N7P3 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLDN22Q8N7P3 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.18■□□□□ 0.66
CLDN22Q8N7P3 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLDN22Q8N7P3 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLDN22Q8N7P3 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
CLDN22Q8N7P3 AC008406.3-201ENST00000620001 1374 ntBASIC19.18■□□□□ 0.66
CLDN22Q8N7P3 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLDN22Q8N7P3 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
CLDN22Q8N7P3 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.17■□□□□ 0.66
CLDN22Q8N7P3 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLDN22Q8N7P3 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms