Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
ZNF546Q86UE3 AC073314.1-201ENST00000568729 2216 ntBASIC17.55■□□□□ 0.4
ZNF546Q86UE3 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ZNF546Q86UE3 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ZNF546Q86UE3 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
ZNF546Q86UE3 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
ZNF546Q86UE3 DYM-203ENST00000442713 2147 ntTSL 2 BASIC17.54■□□□□ 0.4
ZNF546Q86UE3 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
ZNF546Q86UE3 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC17.54■□□□□ 0.4
ZNF546Q86UE3 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
ZNF546Q86UE3 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
ZNF546Q86UE3 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ZNF546Q86UE3 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
ZNF546Q86UE3 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
ZNF546Q86UE3 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC17.54■□□□□ 0.4
ZNF546Q86UE3 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ZNF546Q86UE3 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ZNF546Q86UE3 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC17.54■□□□□ 0.4
ZNF546Q86UE3 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC17.54■□□□□ 0.4
ZNF546Q86UE3 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ZNF546Q86UE3 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
ZNF546Q86UE3 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC17.54■□□□□ 0.4
ZNF546Q86UE3 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ZNF546Q86UE3 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ZNF546Q86UE3 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ZNF546Q86UE3 AL049796.1-201ENST00000565336 1766 ntBASIC17.53■□□□□ 0.4
ZNF546Q86UE3 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC17.53■□□□□ 0.4
ZNF546Q86UE3 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC17.53■□□□□ 0.4
ZNF546Q86UE3 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ZNF546Q86UE3 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
ZNF546Q86UE3 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC17.53■□□□□ 0.4
ZNF546Q86UE3 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
ZNF546Q86UE3 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ZNF546Q86UE3 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC17.53■□□□□ 0.4
ZNF546Q86UE3 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC17.53■□□□□ 0.4
ZNF546Q86UE3 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
ZNF546Q86UE3 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ZNF546Q86UE3 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ZNF546Q86UE3 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC17.53■□□□□ 0.4
ZNF546Q86UE3 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ZNF546Q86UE3 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
ZNF546Q86UE3 AC138932.1-201ENST00000534164 6830 ntBASIC17.52■□□□□ 0.4
ZNF546Q86UE3 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC17.52■□□□□ 0.4
ZNF546Q86UE3 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC17.52■□□□□ 0.4
ZNF546Q86UE3 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ZNF546Q86UE3 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC17.52■□□□□ 0.4
ZNF546Q86UE3 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
ZNF546Q86UE3 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
ZNF546Q86UE3 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
ZNF546Q86UE3 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ZNF546Q86UE3 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ZNF546Q86UE3 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC17.52■□□□□ 0.4
ZNF546Q86UE3 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC17.52■□□□□ 0.4
ZNF546Q86UE3 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
ZNF546Q86UE3 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
ZNF546Q86UE3 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC17.52■□□□□ 0.39
ZNF546Q86UE3 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
ZNF546Q86UE3 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
ZNF546Q86UE3 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC17.52■□□□□ 0.39
ZNF546Q86UE3 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC17.52■□□□□ 0.39
ZNF546Q86UE3 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
ZNF546Q86UE3 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
ZNF546Q86UE3 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ZNF546Q86UE3 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC17.51■□□□□ 0.39
ZNF546Q86UE3 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC17.51■□□□□ 0.39
ZNF546Q86UE3 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
ZNF546Q86UE3 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC17.51■□□□□ 0.39
ZNF546Q86UE3 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC17.51■□□□□ 0.39
ZNF546Q86UE3 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC17.51■□□□□ 0.39
ZNF546Q86UE3 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
ZNF546Q86UE3 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
ZNF546Q86UE3 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC17.51■□□□□ 0.39
ZNF546Q86UE3 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC17.51■□□□□ 0.39
ZNF546Q86UE3 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC17.51■□□□□ 0.39
ZNF546Q86UE3 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
ZNF546Q86UE3 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
ZNF546Q86UE3 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ZNF546Q86UE3 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
ZNF546Q86UE3 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ZNF546Q86UE3 ABHD17AP3-201ENST00000503096 1137 ntBASIC17.5■□□□□ 0.39
ZNF546Q86UE3 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
ZNF546Q86UE3 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
ZNF546Q86UE3 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ZNF546Q86UE3 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ZNF546Q86UE3 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
ZNF546Q86UE3 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ZNF546Q86UE3 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
ZNF546Q86UE3 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC17.5■□□□□ 0.39
ZNF546Q86UE3 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC17.5■□□□□ 0.39
ZNF546Q86UE3 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ZNF546Q86UE3 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
ZNF546Q86UE3 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
ZNF546Q86UE3 SMG8-203ENST00000578922 2178 ntBASIC17.49■□□□□ 0.39
ZNF546Q86UE3 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
ZNF546Q86UE3 AC018445.3-201ENST00000624177 1945 ntBASIC17.49■□□□□ 0.39
ZNF546Q86UE3 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
ZNF546Q86UE3 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ZNF546Q86UE3 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC17.49■□□□□ 0.39
ZNF546Q86UE3 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ZNF546Q86UE3 BID-204ENST00000399767 2129 ntTSL 2 BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms