Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRRK2Q5S007 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
LRRK2Q5S007 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRRK2Q5S007 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LRRK2Q5S007 PRKY-204ENST00000533551 1019 ntBASIC18.61■□□□□ 0.57
LRRK2Q5S007 AL590326.2-201ENST00000625139 305 ntBASIC18.61■□□□□ 0.57
LRRK2Q5S007 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC18.61■□□□□ 0.57
LRRK2Q5S007 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRRK2Q5S007 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LRRK2Q5S007 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LRRK2Q5S007 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
LRRK2Q5S007 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
LRRK2Q5S007 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC18.6■□□□□ 0.57
LRRK2Q5S007 AC133681.1-201ENST00000465482 601 ntBASIC18.6■□□□□ 0.57
LRRK2Q5S007 CD44-222ENST00000526025 1052 ntTSL 2 BASIC18.6■□□□□ 0.57
LRRK2Q5S007 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
LRRK2Q5S007 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC18.6■□□□□ 0.57
LRRK2Q5S007 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LRRK2Q5S007 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC18.6■□□□□ 0.57
LRRK2Q5S007 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
LRRK2Q5S007 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LRRK2Q5S007 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
LRRK2Q5S007 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC18.6■□□□□ 0.57
LRRK2Q5S007 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LRRK2Q5S007 LSM12P1-201ENST00000411836 588 ntBASIC18.6■□□□□ 0.57
LRRK2Q5S007 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC18.6■□□□□ 0.57
LRRK2Q5S007 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC18.6■□□□□ 0.57
LRRK2Q5S007 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC18.6■□□□□ 0.57
LRRK2Q5S007 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC18.6■□□□□ 0.57
LRRK2Q5S007 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC18.6■□□□□ 0.57
LRRK2Q5S007 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC18.6■□□□□ 0.57
LRRK2Q5S007 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
LRRK2Q5S007 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
LRRK2Q5S007 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC18.59■□□□□ 0.57
LRRK2Q5S007 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LRRK2Q5S007 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
LRRK2Q5S007 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC18.59■□□□□ 0.57
LRRK2Q5S007 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC18.59■□□□□ 0.57
LRRK2Q5S007 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC18.59■□□□□ 0.57
LRRK2Q5S007 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LRRK2Q5S007 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LRRK2Q5S007 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LRRK2Q5S007 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LRRK2Q5S007 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
LRRK2Q5S007 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC18.59■□□□□ 0.57
LRRK2Q5S007 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LRRK2Q5S007 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LRRK2Q5S007 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LRRK2Q5S007 DUSP8P4-201ENST00000399538 1761 ntBASIC18.59■□□□□ 0.57
LRRK2Q5S007 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
LRRK2Q5S007 AP003071.4-201ENST00000562276 1284 ntBASIC18.58■□□□□ 0.57
LRRK2Q5S007 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.57
LRRK2Q5S007 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC18.58■□□□□ 0.57
LRRK2Q5S007 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC18.58■□□□□ 0.57
LRRK2Q5S007 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC18.58■□□□□ 0.56
LRRK2Q5S007 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
LRRK2Q5S007 AL355472.2-201ENST00000422958 438 ntBASIC18.58■□□□□ 0.56
LRRK2Q5S007 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
LRRK2Q5S007 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC18.58■□□□□ 0.56
LRRK2Q5S007 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC18.58■□□□□ 0.56
LRRK2Q5S007 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
LRRK2Q5S007 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
LRRK2Q5S007 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC18.58■□□□□ 0.56
LRRK2Q5S007 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LRRK2Q5S007 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LRRK2Q5S007 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LRRK2Q5S007 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LRRK2Q5S007 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC18.57■□□□□ 0.56
LRRK2Q5S007 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC18.57■□□□□ 0.56
LRRK2Q5S007 AC145285.6-201ENST00000604632 637 ntBASIC18.57■□□□□ 0.56
LRRK2Q5S007 MTDHP1-201ENST00000605323 784 ntBASIC18.57■□□□□ 0.56
LRRK2Q5S007 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC18.57■□□□□ 0.56
LRRK2Q5S007 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC18.57■□□□□ 0.56
LRRK2Q5S007 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LRRK2Q5S007 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LRRK2Q5S007 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC18.57■□□□□ 0.56
LRRK2Q5S007 PBX1-209ENST00000485769 834 ntTSL 2 BASIC18.57■□□□□ 0.56
LRRK2Q5S007 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
LRRK2Q5S007 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LRRK2Q5S007 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
LRRK2Q5S007 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
LRRK2Q5S007 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LRRK2Q5S007 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
LRRK2Q5S007 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LRRK2Q5S007 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
LRRK2Q5S007 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
LRRK2Q5S007 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LRRK2Q5S007 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
LRRK2Q5S007 NME6-213ENST00000451657 871 ntTSL 2 BASIC18.56■□□□□ 0.56
LRRK2Q5S007 AL589743.5-201ENST00000616611 1050 ntBASIC18.56■□□□□ 0.56
LRRK2Q5S007 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC18.56■□□□□ 0.56
LRRK2Q5S007 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC18.56■□□□□ 0.56
LRRK2Q5S007 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
LRRK2Q5S007 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC18.56■□□□□ 0.56
LRRK2Q5S007 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LRRK2Q5S007 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
LRRK2Q5S007 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC18.56■□□□□ 0.56
LRRK2Q5S007 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
LRRK2Q5S007 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC18.56■□□□□ 0.56
LRRK2Q5S007 AC239809.2-201ENST00000415381 517 ntBASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms