Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.36■□□□□ 0.85
HMGCS1Q01581 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HMGCS1Q01581 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
HMGCS1Q01581 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
HMGCS1Q01581 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
HMGCS1Q01581 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.35■□□□□ 0.85
HMGCS1Q01581 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.35■□□□□ 0.85
HMGCS1Q01581 TSPY26P-201ENST00000476365 1326 ntBASIC20.35■□□□□ 0.85
HMGCS1Q01581 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HMGCS1Q01581 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
HMGCS1Q01581 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC20.35■□□□□ 0.85
HMGCS1Q01581 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
HMGCS1Q01581 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC20.35■□□□□ 0.85
HMGCS1Q01581 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
HMGCS1Q01581 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HMGCS1Q01581 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
HMGCS1Q01581 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC20.35■□□□□ 0.85
HMGCS1Q01581 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC20.35■□□□□ 0.85
HMGCS1Q01581 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.35■□□□□ 0.85
HMGCS1Q01581 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.35■□□□□ 0.85
HMGCS1Q01581 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
HMGCS1Q01581 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HMGCS1Q01581 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
HMGCS1Q01581 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
HMGCS1Q01581 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.34■□□□□ 0.85
HMGCS1Q01581 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HMGCS1Q01581 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.34■□□□□ 0.85
HMGCS1Q01581 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HMGCS1Q01581 AP001330.3-201ENST00000520123 633 ntBASIC20.34■□□□□ 0.85
HMGCS1Q01581 AICDA-202ENST00000537228 667 ntTSL 5 BASIC20.34■□□□□ 0.85
HMGCS1Q01581 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
HMGCS1Q01581 AC027682.1-201ENST00000562846 899 ntBASIC20.34■□□□□ 0.85
HMGCS1Q01581 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.34■□□□□ 0.85
HMGCS1Q01581 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.34■□□□□ 0.85
HMGCS1Q01581 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC20.34■□□□□ 0.85
HMGCS1Q01581 MPST-208ENST00000628507 698 ntTSL 5 BASIC20.34■□□□□ 0.85
HMGCS1Q01581 RALB-208ENST00000631312 311 ntTSL 5 BASIC20.34■□□□□ 0.85
HMGCS1Q01581 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HMGCS1Q01581 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HMGCS1Q01581 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HMGCS1Q01581 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HMGCS1Q01581 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HMGCS1Q01581 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HMGCS1Q01581 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HMGCS1Q01581 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HMGCS1Q01581 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
HMGCS1Q01581 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
HMGCS1Q01581 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
HMGCS1Q01581 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.33■□□□□ 0.85
HMGCS1Q01581 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
HMGCS1Q01581 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.33■□□□□ 0.85
HMGCS1Q01581 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
HMGCS1Q01581 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC20.33■□□□□ 0.85
HMGCS1Q01581 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC20.33■□□□□ 0.85
HMGCS1Q01581 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
HMGCS1Q01581 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.33■□□□□ 0.84
HMGCS1Q01581 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
HMGCS1Q01581 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
HMGCS1Q01581 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
HMGCS1Q01581 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.33■□□□□ 0.84
HMGCS1Q01581 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HMGCS1Q01581 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
HMGCS1Q01581 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
HMGCS1Q01581 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HMGCS1Q01581 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HMGCS1Q01581 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.32■□□□□ 0.84
HMGCS1Q01581 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
HMGCS1Q01581 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
HMGCS1Q01581 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC20.32■□□□□ 0.84
HMGCS1Q01581 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC20.32■□□□□ 0.84
HMGCS1Q01581 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC20.32■□□□□ 0.84
HMGCS1Q01581 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC20.32■□□□□ 0.84
HMGCS1Q01581 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
HMGCS1Q01581 AC105233.4-201ENST00000642045 216 ntBASIC20.32■□□□□ 0.84
HMGCS1Q01581 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HMGCS1Q01581 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
HMGCS1Q01581 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
HMGCS1Q01581 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
HMGCS1Q01581 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HMGCS1Q01581 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
HMGCS1Q01581 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HMGCS1Q01581 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC20.31■□□□□ 0.84
HMGCS1Q01581 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HMGCS1Q01581 LHPP-203ENST00000392757 840 ntTSL 3 BASIC20.31■□□□□ 0.84
HMGCS1Q01581 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.31■□□□□ 0.84
HMGCS1Q01581 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HMGCS1Q01581 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
HMGCS1Q01581 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
HMGCS1Q01581 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
HMGCS1Q01581 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
HMGCS1Q01581 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HMGCS1Q01581 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
HMGCS1Q01581 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
HMGCS1Q01581 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
HMGCS1Q01581 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC20.31■□□□□ 0.84
HMGCS1Q01581 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HMGCS1Q01581 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HMGCS1Q01581 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
HMGCS1Q01581 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC20.3■□□□□ 0.84
HMGCS1Q01581 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms