Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.1
IRX4P78413 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
IRX4P78413 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC21.89■■□□□ 1.1
IRX4P78413 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC21.89■■□□□ 1.1
IRX4P78413 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
IRX4P78413 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC21.89■■□□□ 1.09
IRX4P78413 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
IRX4P78413 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC21.89■■□□□ 1.09
IRX4P78413 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC21.89■■□□□ 1.09
IRX4P78413 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC21.89■■□□□ 1.09
IRX4P78413 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC21.89■■□□□ 1.09
IRX4P78413 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
IRX4P78413 AL109923.1-201ENST00000618799 583 ntBASIC21.89■■□□□ 1.09
IRX4P78413 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC21.89■■□□□ 1.09
IRX4P78413 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
IRX4P78413 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.89■■□□□ 1.09
IRX4P78413 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC21.89■■□□□ 1.09
IRX4P78413 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
IRX4P78413 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC21.89■■□□□ 1.09
IRX4P78413 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
IRX4P78413 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
IRX4P78413 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
IRX4P78413 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC21.88■■□□□ 1.09
IRX4P78413 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
IRX4P78413 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
IRX4P78413 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
IRX4P78413 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
IRX4P78413 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
IRX4P78413 CROCCP5-201ENST00000436658 830 ntBASIC21.88■■□□□ 1.09
IRX4P78413 AC006970.2-201ENST00000450065 779 ntBASIC21.88■■□□□ 1.09
IRX4P78413 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC21.88■■□□□ 1.09
IRX4P78413 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC21.88■■□□□ 1.09
IRX4P78413 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC21.88■■□□□ 1.09
IRX4P78413 TPRG1LP1-201ENST00000598702 760 ntBASIC21.88■■□□□ 1.09
IRX4P78413 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
IRX4P78413 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
IRX4P78413 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
IRX4P78413 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
IRX4P78413 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
IRX4P78413 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
IRX4P78413 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
IRX4P78413 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC21.87■■□□□ 1.09
IRX4P78413 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
IRX4P78413 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
IRX4P78413 AC004854.2-201ENST00000608450 1441 ntBASIC21.87■■□□□ 1.09
IRX4P78413 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
IRX4P78413 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC21.87■■□□□ 1.09
IRX4P78413 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
IRX4P78413 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
IRX4P78413 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
IRX4P78413 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
IRX4P78413 STX4-202ENST00000394998 1498 ntTSL 2 BASIC21.86■■□□□ 1.09
IRX4P78413 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
IRX4P78413 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC21.86■■□□□ 1.09
IRX4P78413 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
IRX4P78413 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC21.86■■□□□ 1.09
IRX4P78413 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC21.86■■□□□ 1.09
IRX4P78413 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC21.86■■□□□ 1.09
IRX4P78413 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC21.86■■□□□ 1.09
IRX4P78413 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
IRX4P78413 TMEM191A-211ENST00000637163 1067 ntBASIC21.86■■□□□ 1.09
IRX4P78413 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC21.86■■□□□ 1.09
IRX4P78413 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
IRX4P78413 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
IRX4P78413 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
IRX4P78413 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
IRX4P78413 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
IRX4P78413 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
IRX4P78413 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
IRX4P78413 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
IRX4P78413 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC21.85■■□□□ 1.09
IRX4P78413 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC21.85■■□□□ 1.09
IRX4P78413 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
IRX4P78413 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
IRX4P78413 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC21.84■■□□□ 1.09
IRX4P78413 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
IRX4P78413 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
IRX4P78413 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
IRX4P78413 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
IRX4P78413 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
IRX4P78413 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
IRX4P78413 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
IRX4P78413 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
IRX4P78413 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC21.83■■□□□ 1.09
IRX4P78413 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
IRX4P78413 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
IRX4P78413 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC21.83■■□□□ 1.09
IRX4P78413 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
IRX4P78413 NCF1B-203ENST00000435988 1254 ntBASIC21.83■■□□□ 1.09
IRX4P78413 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
IRX4P78413 WWOX-218ENST00000627394 894 ntTSL 5 BASIC21.83■■□□□ 1.09
IRX4P78413 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC21.83■■□□□ 1.09
IRX4P78413 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.08
IRX4P78413 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC21.83■■□□□ 1.08
IRX4P78413 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC21.83■■□□□ 1.08
IRX4P78413 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
IRX4P78413 LINC01529-204ENST00000636474 1715 ntBASIC21.83■■□□□ 1.08
IRX4P78413 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
IRX4P78413 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
IRX4P78413 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms