Protein–RNA interactions for Protein: P62995

TRA2B, Transformer-2 protein homolog beta, humanhuman

Known RBP Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2BP62995 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
TRA2BP62995 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20■□□□□ 0.79
TRA2BP62995 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
TRA2BP62995 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
TRA2BP62995 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
TRA2BP62995 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRA2BP62995 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
TRA2BP62995 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.99■□□□□ 0.79
TRA2BP62995 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TRA2BP62995 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.99■□□□□ 0.79
TRA2BP62995 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRA2BP62995 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
TRA2BP62995 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRA2BP62995 EEF1DP3-203ENST00000566025 782 ntBASIC19.99■□□□□ 0.79
TRA2BP62995 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC19.99■□□□□ 0.79
TRA2BP62995 AC053503.5-201ENST00000601508 636 ntBASIC19.99■□□□□ 0.79
TRA2BP62995 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC19.99■□□□□ 0.79
TRA2BP62995 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TRA2BP62995 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
TRA2BP62995 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRA2BP62995 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRA2BP62995 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRA2BP62995 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
TRA2BP62995 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRA2BP62995 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC19.98■□□□□ 0.79
TRA2BP62995 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRA2BP62995 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.98■□□□□ 0.79
TRA2BP62995 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRA2BP62995 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TRA2BP62995 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRA2BP62995 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC19.98■□□□□ 0.79
TRA2BP62995 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TRA2BP62995 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRA2BP62995 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRA2BP62995 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRA2BP62995 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
TRA2BP62995 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC19.98■□□□□ 0.79
TRA2BP62995 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
TRA2BP62995 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRA2BP62995 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC19.97■□□□□ 0.79
TRA2BP62995 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRA2BP62995 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRA2BP62995 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC19.97■□□□□ 0.79
TRA2BP62995 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TRA2BP62995 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
TRA2BP62995 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRA2BP62995 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.97■□□□□ 0.79
TRA2BP62995 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRA2BP62995 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRA2BP62995 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRA2BP62995 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.96■□□□□ 0.79
TRA2BP62995 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRA2BP62995 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
TRA2BP62995 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TRA2BP62995 AC123595.1-201ENST00000440769 1046 ntBASIC19.96■□□□□ 0.79
TRA2BP62995 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC19.96■□□□□ 0.79
TRA2BP62995 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC19.96■□□□□ 0.79
TRA2BP62995 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TRA2BP62995 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRA2BP62995 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRA2BP62995 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
TRA2BP62995 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
TRA2BP62995 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRA2BP62995 LINC02228-203ENST00000641970 1355 ntBASIC19.95■□□□□ 0.79
TRA2BP62995 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.95■□□□□ 0.78
TRA2BP62995 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRA2BP62995 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRA2BP62995 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC19.95■□□□□ 0.78
TRA2BP62995 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.95■□□□□ 0.78
TRA2BP62995 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRA2BP62995 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC19.95■□□□□ 0.78
TRA2BP62995 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC19.95■□□□□ 0.78
TRA2BP62995 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC19.95■□□□□ 0.78
TRA2BP62995 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRA2BP62995 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
TRA2BP62995 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRA2BP62995 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRA2BP62995 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TRA2BP62995 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TRA2BP62995 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TRA2BP62995 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.95■□□□□ 0.78
TRA2BP62995 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRA2BP62995 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRA2BP62995 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRA2BP62995 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC19.94■□□□□ 0.78
TRA2BP62995 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRA2BP62995 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.94■□□□□ 0.78
TRA2BP62995 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TRA2BP62995 JTB-203ENST00000368589 1216 ntTSL 2 BASIC19.94■□□□□ 0.78
TRA2BP62995 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRA2BP62995 AC079140.4-201ENST00000507448 529 ntBASIC19.94■□□□□ 0.78
TRA2BP62995 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRA2BP62995 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC19.94■□□□□ 0.78
TRA2BP62995 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.94■□□□□ 0.78
TRA2BP62995 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRA2BP62995 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
TRA2BP62995 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
TRA2BP62995 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRA2BP62995 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRA2BP62995 AL024507.2-201ENST00000606070 2574 ntBASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms