Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RPS4XP62701 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
RPS4XP62701 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
RPS4XP62701 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
RPS4XP62701 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RPS4XP62701 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
RPS4XP62701 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
RPS4XP62701 AL358852.1-201ENST00000623174 1268 ntBASIC19.08■□□□□ 0.64
RPS4XP62701 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC19.08■□□□□ 0.64
RPS4XP62701 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
RPS4XP62701 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
RPS4XP62701 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC19.07■□□□□ 0.64
RPS4XP62701 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RPS4XP62701 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RPS4XP62701 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RPS4XP62701 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RPS4XP62701 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RPS4XP62701 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RPS4XP62701 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC19.07■□□□□ 0.64
RPS4XP62701 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
RPS4XP62701 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RPS4XP62701 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
RPS4XP62701 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.07■□□□□ 0.64
RPS4XP62701 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC19.07■□□□□ 0.64
RPS4XP62701 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC19.07■□□□□ 0.64
RPS4XP62701 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC19.07■□□□□ 0.64
RPS4XP62701 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC19.07■□□□□ 0.64
RPS4XP62701 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RPS4XP62701 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RPS4XP62701 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC19.07■□□□□ 0.64
RPS4XP62701 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC19.07■□□□□ 0.64
RPS4XP62701 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RPS4XP62701 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RPS4XP62701 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
RPS4XP62701 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
RPS4XP62701 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RPS4XP62701 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RPS4XP62701 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RPS4XP62701 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.06■□□□□ 0.64
RPS4XP62701 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RPS4XP62701 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
RPS4XP62701 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
RPS4XP62701 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RPS4XP62701 LHPP-203ENST00000392757 840 ntTSL 3 BASIC19.06■□□□□ 0.64
RPS4XP62701 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC19.06■□□□□ 0.64
RPS4XP62701 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
RPS4XP62701 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
RPS4XP62701 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RPS4XP62701 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RPS4XP62701 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
RPS4XP62701 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RPS4XP62701 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RPS4XP62701 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC19.05■□□□□ 0.64
RPS4XP62701 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RPS4XP62701 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC19.05■□□□□ 0.64
RPS4XP62701 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RPS4XP62701 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RPS4XP62701 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.05■□□□□ 0.64
RPS4XP62701 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RPS4XP62701 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.05■□□□□ 0.64
RPS4XP62701 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
RPS4XP62701 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC19.05■□□□□ 0.64
RPS4XP62701 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
RPS4XP62701 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC19.05■□□□□ 0.64
RPS4XP62701 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
RPS4XP62701 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RPS4XP62701 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC19.05■□□□□ 0.64
RPS4XP62701 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19.05■□□□□ 0.64
RPS4XP62701 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.05■□□□□ 0.64
RPS4XP62701 AC009237.3-201ENST00000393279 1427 ntBASIC19.05■□□□□ 0.64
RPS4XP62701 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RPS4XP62701 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RPS4XP62701 AC055733.4-201ENST00000638462 1354 ntBASIC19.05■□□□□ 0.64
RPS4XP62701 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC19.05■□□□□ 0.64
RPS4XP62701 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RPS4XP62701 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
RPS4XP62701 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
RPS4XP62701 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RPS4XP62701 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RPS4XP62701 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RPS4XP62701 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RPS4XP62701 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
RPS4XP62701 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RPS4XP62701 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC19.04■□□□□ 0.64
RPS4XP62701 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC19.04■□□□□ 0.64
RPS4XP62701 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RPS4XP62701 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.04■□□□□ 0.64
RPS4XP62701 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.04■□□□□ 0.64
RPS4XP62701 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RPS4XP62701 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RPS4XP62701 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RPS4XP62701 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.03■□□□□ 0.64
RPS4XP62701 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RPS4XP62701 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
RPS4XP62701 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.03■□□□□ 0.64
RPS4XP62701 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RPS4XP62701 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
RPS4XP62701 MIR572-201ENST00000384983 95 ntBASIC19.03■□□□□ 0.64
RPS4XP62701 AC027612.3-201ENST00000413684 1047 ntBASIC19.03■□□□□ 0.64
RPS4XP62701 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms