Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC25.89■■□□□ 1.74
PDE1AP54750 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
PDE1AP54750 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
PDE1AP54750 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
PDE1AP54750 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
PDE1AP54750 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC25.89■■□□□ 1.73
PDE1AP54750 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
PDE1AP54750 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
PDE1AP54750 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC25.88■■□□□ 1.73
PDE1AP54750 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
PDE1AP54750 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
PDE1AP54750 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC25.88■■□□□ 1.73
PDE1AP54750 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
PDE1AP54750 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC25.88■■□□□ 1.73
PDE1AP54750 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC25.88■■□□□ 1.73
PDE1AP54750 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
PDE1AP54750 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
PDE1AP54750 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC25.88■■□□□ 1.73
PDE1AP54750 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
PDE1AP54750 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
PDE1AP54750 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC25.88■■□□□ 1.73
PDE1AP54750 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC25.88■■□□□ 1.73
PDE1AP54750 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC25.88■■□□□ 1.73
PDE1AP54750 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
PDE1AP54750 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
PDE1AP54750 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
PDE1AP54750 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
PDE1AP54750 MFF-207ENST00000409565 1548 ntTSL 2 BASIC25.88■■□□□ 1.73
PDE1AP54750 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
PDE1AP54750 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC25.88■■□□□ 1.73
PDE1AP54750 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
PDE1AP54750 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
PDE1AP54750 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
PDE1AP54750 RNF146-206ENST00000480444 843 ntTSL 2 BASIC25.87■■□□□ 1.73
PDE1AP54750 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC25.87■■□□□ 1.73
PDE1AP54750 EEF1DP3-203ENST00000566025 782 ntBASIC25.87■■□□□ 1.73
PDE1AP54750 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC25.87■■□□□ 1.73
PDE1AP54750 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
PDE1AP54750 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
PDE1AP54750 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
PDE1AP54750 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC25.87■■□□□ 1.73
PDE1AP54750 RARG-204ENST00000543726 1779 ntTSL 2 BASIC25.87■■□□□ 1.73
PDE1AP54750 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
PDE1AP54750 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC25.87■■□□□ 1.73
PDE1AP54750 STX5-203ENST00000394690 1568 ntTSL 5 BASIC25.86■■□□□ 1.73
PDE1AP54750 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC25.86■■□□□ 1.73
PDE1AP54750 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC25.86■■□□□ 1.73
PDE1AP54750 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
PDE1AP54750 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC25.86■■□□□ 1.73
PDE1AP54750 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC25.86■■□□□ 1.73
PDE1AP54750 SP2-202ENST00000613139 908 ntTSL 5 BASIC25.86■■□□□ 1.73
PDE1AP54750 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC25.86■■□□□ 1.73
PDE1AP54750 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC25.86■■□□□ 1.73
PDE1AP54750 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC25.85■■□□□ 1.73
PDE1AP54750 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC25.85■■□□□ 1.73
PDE1AP54750 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
PDE1AP54750 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
PDE1AP54750 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
PDE1AP54750 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC25.85■■□□□ 1.73
PDE1AP54750 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
PDE1AP54750 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC25.85■■□□□ 1.73
PDE1AP54750 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
PDE1AP54750 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
PDE1AP54750 LINC02228-203ENST00000641970 1355 ntBASIC25.84■■□□□ 1.73
PDE1AP54750 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
PDE1AP54750 GUK1-205ENST00000366722 850 ntTSL 3 BASIC25.84■■□□□ 1.73
PDE1AP54750 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
PDE1AP54750 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC25.84■■□□□ 1.73
PDE1AP54750 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC25.84■■□□□ 1.73
PDE1AP54750 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC25.84■■□□□ 1.73
PDE1AP54750 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
PDE1AP54750 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
PDE1AP54750 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC25.84■■□□□ 1.73
PDE1AP54750 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
PDE1AP54750 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
PDE1AP54750 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
PDE1AP54750 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC25.83■■□□□ 1.73
PDE1AP54750 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC25.83■■□□□ 1.73
PDE1AP54750 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC25.83■■□□□ 1.73
PDE1AP54750 AC123595.1-201ENST00000440769 1046 ntBASIC25.83■■□□□ 1.73
PDE1AP54750 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC25.83■■□□□ 1.73
PDE1AP54750 AC053503.5-201ENST00000601508 636 ntBASIC25.83■■□□□ 1.73
PDE1AP54750 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC25.83■■□□□ 1.73
PDE1AP54750 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
PDE1AP54750 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.72
PDE1AP54750 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC25.82■■□□□ 1.72
PDE1AP54750 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC25.82■■□□□ 1.72
PDE1AP54750 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
PDE1AP54750 YBX1P1-201ENST00000445822 960 ntBASIC25.82■■□□□ 1.72
PDE1AP54750 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
PDE1AP54750 PALM-207ENST00000590161 2137 ntTSL 4 BASIC25.82■■□□□ 1.72
PDE1AP54750 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
PDE1AP54750 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
PDE1AP54750 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC25.81■■□□□ 1.72
PDE1AP54750 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC25.81■■□□□ 1.72
PDE1AP54750 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
PDE1AP54750 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
PDE1AP54750 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC25.81■■□□□ 1.72
PDE1AP54750 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
PDE1AP54750 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms