Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
PTPN6P29350 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
PTPN6P29350 AP004607.7-201ENST00000527152 1677 ntBASIC20.07■□□□□ 0.8
PTPN6P29350 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.06■□□□□ 0.8
PTPN6P29350 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
PTPN6P29350 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
PTPN6P29350 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC20.06■□□□□ 0.8
PTPN6P29350 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PTPN6P29350 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
PTPN6P29350 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PTPN6P29350 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PTPN6P29350 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.06■□□□□ 0.8
PTPN6P29350 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PTPN6P29350 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PTPN6P29350 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
PTPN6P29350 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.05■□□□□ 0.8
PTPN6P29350 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
PTPN6P29350 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.05■□□□□ 0.8
PTPN6P29350 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC20.05■□□□□ 0.8
PTPN6P29350 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PTPN6P29350 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.05■□□□□ 0.8
PTPN6P29350 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PTPN6P29350 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PTPN6P29350 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
PTPN6P29350 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PTPN6P29350 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC20.05■□□□□ 0.8
PTPN6P29350 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PTPN6P29350 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PTPN6P29350 SLC25A24-204ENST00000569674 2357 ntBASIC20.04■□□□□ 0.8
PTPN6P29350 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PTPN6P29350 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC20.04■□□□□ 0.8
PTPN6P29350 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.04■□□□□ 0.8
PTPN6P29350 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PTPN6P29350 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC20.04■□□□□ 0.8
PTPN6P29350 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.04■□□□□ 0.8
PTPN6P29350 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PTPN6P29350 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PTPN6P29350 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.03■□□□□ 0.8
PTPN6P29350 AL049796.1-201ENST00000565336 1766 ntBASIC20.03■□□□□ 0.8
PTPN6P29350 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PTPN6P29350 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PTPN6P29350 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PTPN6P29350 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
PTPN6P29350 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PTPN6P29350 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
PTPN6P29350 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
PTPN6P29350 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
PTPN6P29350 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PTPN6P29350 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PTPN6P29350 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PTPN6P29350 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
PTPN6P29350 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
PTPN6P29350 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PTPN6P29350 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PTPN6P29350 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PTPN6P29350 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PTPN6P29350 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PTPN6P29350 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PTPN6P29350 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC20.02■□□□□ 0.8
PTPN6P29350 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PTPN6P29350 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20.02■□□□□ 0.8
PTPN6P29350 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PTPN6P29350 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
PTPN6P29350 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PTPN6P29350 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PTPN6P29350 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PTPN6P29350 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
PTPN6P29350 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.01■□□□□ 0.79
PTPN6P29350 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.01■□□□□ 0.79
PTPN6P29350 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.01■□□□□ 0.79
PTPN6P29350 IGHV3-19-201ENST00000521488 291 ntBASIC20.01■□□□□ 0.79
PTPN6P29350 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.01■□□□□ 0.79
PTPN6P29350 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC20.01■□□□□ 0.79
PTPN6P29350 AICDA-202ENST00000537228 667 ntTSL 5 BASIC20.01■□□□□ 0.79
PTPN6P29350 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PTPN6P29350 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PTPN6P29350 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PTPN6P29350 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PTPN6P29350 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PTPN6P29350 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PTPN6P29350 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PTPN6P29350 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PTPN6P29350 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PTPN6P29350 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC20.01■□□□□ 0.79
PTPN6P29350 AP006587.3-201ENST00000525742 1516 ntBASIC20.01■□□□□ 0.79
PTPN6P29350 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PTPN6P29350 TSPY26P-201ENST00000476365 1326 ntBASIC20.01■□□□□ 0.79
PTPN6P29350 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PTPN6P29350 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20■□□□□ 0.79
PTPN6P29350 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
PTPN6P29350 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20■□□□□ 0.79
PTPN6P29350 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
PTPN6P29350 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20■□□□□ 0.79
PTPN6P29350 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
PTPN6P29350 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC20■□□□□ 0.79
PTPN6P29350 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC20■□□□□ 0.79
PTPN6P29350 LGR4-203ENST00000480977 492 ntTSL 2 BASIC20■□□□□ 0.79
PTPN6P29350 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC20■□□□□ 0.79
PTPN6P29350 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC20■□□□□ 0.79
PTPN6P29350 RHOF-204ENST00000537265 699 ntTSL 2 BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms