Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
TNFRSF1BP20333 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.62■□□□□ 0.73
TNFRSF1BP20333 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
TNFRSF1BP20333 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TNFRSF1BP20333 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TNFRSF1BP20333 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TNFRSF1BP20333 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
TNFRSF1BP20333 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TNFRSF1BP20333 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
TNFRSF1BP20333 AL034346.1-201ENST00000568244 1277 ntBASIC19.61■□□□□ 0.73
TNFRSF1BP20333 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC19.61■□□□□ 0.73
TNFRSF1BP20333 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.61■□□□□ 0.73
TNFRSF1BP20333 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TNFRSF1BP20333 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
TNFRSF1BP20333 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.61■□□□□ 0.73
TNFRSF1BP20333 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.61■□□□□ 0.73
TNFRSF1BP20333 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TNFRSF1BP20333 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TNFRSF1BP20333 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TNFRSF1BP20333 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TNFRSF1BP20333 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TNFRSF1BP20333 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TNFRSF1BP20333 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TNFRSF1BP20333 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
TNFRSF1BP20333 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TNFRSF1BP20333 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
TNFRSF1BP20333 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC19.6■□□□□ 0.73
TNFRSF1BP20333 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
TNFRSF1BP20333 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
TNFRSF1BP20333 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.6■□□□□ 0.73
TNFRSF1BP20333 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TNFRSF1BP20333 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TNFRSF1BP20333 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TNFRSF1BP20333 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TNFRSF1BP20333 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.59■□□□□ 0.73
TNFRSF1BP20333 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TNFRSF1BP20333 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TNFRSF1BP20333 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC19.59■□□□□ 0.73
TNFRSF1BP20333 AC131281.2-201ENST00000520478 145 ntBASIC19.59■□□□□ 0.73
TNFRSF1BP20333 AL138724.1-201ENST00000606771 1088 ntBASIC19.59■□□□□ 0.73
TNFRSF1BP20333 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TNFRSF1BP20333 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TNFRSF1BP20333 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC19.59■□□□□ 0.73
TNFRSF1BP20333 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
TNFRSF1BP20333 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TNFRSF1BP20333 LINC01521-201ENST00000504184 1943 ntBASIC19.59■□□□□ 0.73
TNFRSF1BP20333 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TNFRSF1BP20333 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
TNFRSF1BP20333 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TNFRSF1BP20333 AP006587.3-201ENST00000525742 1516 ntBASIC19.58■□□□□ 0.73
TNFRSF1BP20333 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
TNFRSF1BP20333 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TNFRSF1BP20333 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
TNFRSF1BP20333 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
TNFRSF1BP20333 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
TNFRSF1BP20333 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
TNFRSF1BP20333 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
TNFRSF1BP20333 AP005435.1-201ENST00000529293 1178 ntBASIC19.58■□□□□ 0.72
TNFRSF1BP20333 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC19.58■□□□□ 0.72
TNFRSF1BP20333 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TNFRSF1BP20333 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TNFRSF1BP20333 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
TNFRSF1BP20333 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TNFRSF1BP20333 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.58■□□□□ 0.72
TNFRSF1BP20333 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.58■□□□□ 0.72
TNFRSF1BP20333 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
TNFRSF1BP20333 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
TNFRSF1BP20333 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TNFRSF1BP20333 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
TNFRSF1BP20333 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TNFRSF1BP20333 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TNFRSF1BP20333 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TNFRSF1BP20333 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TNFRSF1BP20333 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TNFRSF1BP20333 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TNFRSF1BP20333 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TNFRSF1BP20333 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
TNFRSF1BP20333 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TNFRSF1BP20333 AC011298.3-201ENST00000615796 283 ntBASIC19.57■□□□□ 0.72
TNFRSF1BP20333 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
TNFRSF1BP20333 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TNFRSF1BP20333 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TNFRSF1BP20333 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TNFRSF1BP20333 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TNFRSF1BP20333 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TNFRSF1BP20333 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TNFRSF1BP20333 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TNFRSF1BP20333 AC092667.1-201ENST00000434301 2586 ntBASIC19.57■□□□□ 0.72
TNFRSF1BP20333 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TNFRSF1BP20333 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TNFRSF1BP20333 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.57■□□□□ 0.72
TNFRSF1BP20333 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TNFRSF1BP20333 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
TNFRSF1BP20333 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
TNFRSF1BP20333 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
TNFRSF1BP20333 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TNFRSF1BP20333 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TNFRSF1BP20333 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
TNFRSF1BP20333 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC19.56■□□□□ 0.72
TNFRSF1BP20333 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms