Protein–RNA interactions for Protein: P15056

BRAF, Serine/threonine-protein kinase B-raf, humanhuman

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP15056 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
BRAFP15056 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
BRAFP15056 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC21.66■■□□□ 1.06
BRAFP15056 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
BRAFP15056 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
BRAFP15056 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
BRAFP15056 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
BRAFP15056 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
BRAFP15056 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
BRAFP15056 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
BRAFP15056 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC21.66■■□□□ 1.06
BRAFP15056 AC105265.2-201ENST00000467189 838 ntBASIC21.66■■□□□ 1.06
BRAFP15056 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC21.66■■□□□ 1.06
BRAFP15056 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
BRAFP15056 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC21.66■■□□□ 1.06
BRAFP15056 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
BRAFP15056 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
BRAFP15056 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
BRAFP15056 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
BRAFP15056 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC21.65■■□□□ 1.06
BRAFP15056 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
BRAFP15056 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
BRAFP15056 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC21.65■■□□□ 1.06
BRAFP15056 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC21.65■■□□□ 1.06
BRAFP15056 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
BRAFP15056 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
BRAFP15056 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC21.65■■□□□ 1.06
BRAFP15056 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC21.65■■□□□ 1.06
BRAFP15056 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
BRAFP15056 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC21.65■■□□□ 1.06
BRAFP15056 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
BRAFP15056 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
BRAFP15056 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
BRAFP15056 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
BRAFP15056 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
BRAFP15056 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
BRAFP15056 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
BRAFP15056 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
BRAFP15056 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
BRAFP15056 GUK1-205ENST00000366722 850 ntTSL 3 BASIC21.64■■□□□ 1.05
BRAFP15056 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
BRAFP15056 STOX2-205ENST00000513034 807 ntTSL 3 BASIC21.64■■□□□ 1.05
BRAFP15056 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
BRAFP15056 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC21.64■■□□□ 1.05
BRAFP15056 AC010525.1-201ENST00000585559 441 ntBASIC21.64■■□□□ 1.05
BRAFP15056 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC21.64■■□□□ 1.05
BRAFP15056 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC21.64■■□□□ 1.05
BRAFP15056 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
BRAFP15056 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC21.64■■□□□ 1.05
BRAFP15056 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
BRAFP15056 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
BRAFP15056 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
BRAFP15056 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
BRAFP15056 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
BRAFP15056 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
BRAFP15056 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
BRAFP15056 OR2I1P-207ENST00000453522 948 ntBASIC21.63■■□□□ 1.05
BRAFP15056 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
BRAFP15056 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
BRAFP15056 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC21.63■■□□□ 1.05
BRAFP15056 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC21.63■■□□□ 1.05
BRAFP15056 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
BRAFP15056 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC21.62■■□□□ 1.05
BRAFP15056 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC21.62■■□□□ 1.05
BRAFP15056 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
BRAFP15056 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
BRAFP15056 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
BRAFP15056 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
BRAFP15056 MPST-208ENST00000628507 698 ntTSL 5 BASIC21.62■■□□□ 1.05
BRAFP15056 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
BRAFP15056 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC21.62■■□□□ 1.05
BRAFP15056 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
BRAFP15056 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
BRAFP15056 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
BRAFP15056 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
BRAFP15056 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
BRAFP15056 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC21.61■■□□□ 1.05
BRAFP15056 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC21.61■■□□□ 1.05
BRAFP15056 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
BRAFP15056 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC21.61■■□□□ 1.05
BRAFP15056 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
BRAFP15056 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
BRAFP15056 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC21.61■■□□□ 1.05
BRAFP15056 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC21.61■■□□□ 1.05
BRAFP15056 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC21.61■■□□□ 1.05
BRAFP15056 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
BRAFP15056 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC21.61■■□□□ 1.05
BRAFP15056 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
BRAFP15056 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC21.61■■□□□ 1.05
BRAFP15056 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
BRAFP15056 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
BRAFP15056 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
BRAFP15056 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
BRAFP15056 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
BRAFP15056 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC21.6■■□□□ 1.05
BRAFP15056 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
BRAFP15056 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
BRAFP15056 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC21.6■■□□□ 1.05
BRAFP15056 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
BRAFP15056 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms