Protein–RNA interactions for Protein: P09486

SPARC, SPARC, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCP09486 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SPARCP09486 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC18.77■□□□□ 0.6
SPARCP09486 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC18.77■□□□□ 0.6
SPARCP09486 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SPARCP09486 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SPARCP09486 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SPARCP09486 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC18.77■□□□□ 0.6
SPARCP09486 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
SPARCP09486 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC18.77■□□□□ 0.6
SPARCP09486 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC18.77■□□□□ 0.6
SPARCP09486 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SPARCP09486 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC18.77■□□□□ 0.6
SPARCP09486 AC024257.2-201ENST00000549699 147 ntBASIC18.77■□□□□ 0.6
SPARCP09486 AC126544.1-201ENST00000580842 1059 ntBASIC18.77■□□□□ 0.6
SPARCP09486 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SPARCP09486 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
SPARCP09486 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
SPARCP09486 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SPARCP09486 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SPARCP09486 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SPARCP09486 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SPARCP09486 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SPARCP09486 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SPARCP09486 AP006587.3-201ENST00000525742 1516 ntBASIC18.76■□□□□ 0.59
SPARCP09486 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SPARCP09486 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SPARCP09486 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
SPARCP09486 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SPARCP09486 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SPARCP09486 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SPARCP09486 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SPARCP09486 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC18.76■□□□□ 0.59
SPARCP09486 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
SPARCP09486 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
SPARCP09486 AC233992.3-201ENST00000607491 485 ntBASIC18.76■□□□□ 0.59
SPARCP09486 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
SPARCP09486 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
SPARCP09486 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
SPARCP09486 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC18.76■□□□□ 0.59
SPARCP09486 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SPARCP09486 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC18.76■□□□□ 0.59
SPARCP09486 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SPARCP09486 AC135279.3-201ENST00000610945 1311 ntBASIC18.75■□□□□ 0.59
SPARCP09486 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SPARCP09486 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SPARCP09486 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
SPARCP09486 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SPARCP09486 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC18.75■□□□□ 0.59
SPARCP09486 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SPARCP09486 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
SPARCP09486 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SPARCP09486 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC18.75■□□□□ 0.59
SPARCP09486 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC18.75■□□□□ 0.59
SPARCP09486 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC18.75■□□□□ 0.59
SPARCP09486 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC18.75■□□□□ 0.59
SPARCP09486 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
SPARCP09486 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SPARCP09486 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
SPARCP09486 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
SPARCP09486 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.75■□□□□ 0.59
SPARCP09486 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SPARCP09486 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SPARCP09486 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
SPARCP09486 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
SPARCP09486 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
SPARCP09486 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
SPARCP09486 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
SPARCP09486 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SPARCP09486 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SPARCP09486 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
SPARCP09486 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SPARCP09486 SMUG1P1-201ENST00000590640 811 ntBASIC18.74■□□□□ 0.59
SPARCP09486 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC18.74■□□□□ 0.59
SPARCP09486 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.74■□□□□ 0.59
SPARCP09486 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SPARCP09486 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
SPARCP09486 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
SPARCP09486 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SPARCP09486 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
SPARCP09486 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SPARCP09486 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SPARCP09486 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SPARCP09486 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SPARCP09486 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
SPARCP09486 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC18.73■□□□□ 0.59
SPARCP09486 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SPARCP09486 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC18.73■□□□□ 0.59
SPARCP09486 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC18.73■□□□□ 0.59
SPARCP09486 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC18.73■□□□□ 0.59
SPARCP09486 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SPARCP09486 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC18.73■□□□□ 0.59
SPARCP09486 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SPARCP09486 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SPARCP09486 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SPARCP09486 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SPARCP09486 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC18.73■□□□□ 0.59
SPARCP09486 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
SPARCP09486 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC18.73■□□□□ 0.59
SPARCP09486 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
SPARCP09486 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms