Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
THBS1P07996 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
THBS1P07996 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
THBS1P07996 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
THBS1P07996 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
THBS1P07996 NARF-205ENST00000412079 1760 ntTSL 5 BASIC19.47■□□□□ 0.71
THBS1P07996 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
THBS1P07996 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.47■□□□□ 0.71
THBS1P07996 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
THBS1P07996 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
THBS1P07996 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
THBS1P07996 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
THBS1P07996 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
THBS1P07996 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
THBS1P07996 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
THBS1P07996 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
THBS1P07996 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
THBS1P07996 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
THBS1P07996 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
THBS1P07996 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
THBS1P07996 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
THBS1P07996 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC19.46■□□□□ 0.71
THBS1P07996 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.46■□□□□ 0.71
THBS1P07996 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
THBS1P07996 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
THBS1P07996 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
THBS1P07996 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
THBS1P07996 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
THBS1P07996 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
THBS1P07996 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
THBS1P07996 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
THBS1P07996 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
THBS1P07996 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC19.45■□□□□ 0.7
THBS1P07996 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC19.45■□□□□ 0.7
THBS1P07996 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
THBS1P07996 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC19.45■□□□□ 0.7
THBS1P07996 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
THBS1P07996 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.45■□□□□ 0.7
THBS1P07996 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
THBS1P07996 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
THBS1P07996 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.45■□□□□ 0.7
THBS1P07996 STX5-203ENST00000394690 1568 ntTSL 5 BASIC19.44■□□□□ 0.7
THBS1P07996 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.44■□□□□ 0.7
THBS1P07996 AL049796.1-201ENST00000565336 1766 ntBASIC19.44■□□□□ 0.7
THBS1P07996 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.44■□□□□ 0.7
THBS1P07996 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
THBS1P07996 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
THBS1P07996 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.44■□□□□ 0.7
THBS1P07996 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
THBS1P07996 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
THBS1P07996 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
THBS1P07996 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC19.44■□□□□ 0.7
THBS1P07996 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
THBS1P07996 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC19.44■□□□□ 0.7
THBS1P07996 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
THBS1P07996 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
THBS1P07996 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC19.44■□□□□ 0.7
THBS1P07996 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
THBS1P07996 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
THBS1P07996 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.43■□□□□ 0.7
THBS1P07996 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
THBS1P07996 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
THBS1P07996 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC19.43■□□□□ 0.7
THBS1P07996 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC19.43■□□□□ 0.7
THBS1P07996 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC19.43■□□□□ 0.7
THBS1P07996 AC012414.1-201ENST00000556676 535 ntBASIC19.43■□□□□ 0.7
THBS1P07996 MPST-204ENST00000404393 1329 ntTSL 5 BASIC19.43■□□□□ 0.7
THBS1P07996 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
THBS1P07996 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
THBS1P07996 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
THBS1P07996 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
THBS1P07996 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
THBS1P07996 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
THBS1P07996 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19.42■□□□□ 0.7
THBS1P07996 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC19.42■□□□□ 0.7
THBS1P07996 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
THBS1P07996 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.42■□□□□ 0.7
THBS1P07996 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19.42■□□□□ 0.7
THBS1P07996 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
THBS1P07996 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
THBS1P07996 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
THBS1P07996 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
THBS1P07996 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC19.42■□□□□ 0.7
THBS1P07996 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC19.42■□□□□ 0.7
THBS1P07996 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC19.42■□□□□ 0.7
THBS1P07996 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC19.42■□□□□ 0.7
THBS1P07996 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC19.42■□□□□ 0.7
THBS1P07996 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC19.42■□□□□ 0.7
THBS1P07996 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
THBS1P07996 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
THBS1P07996 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
THBS1P07996 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
THBS1P07996 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
THBS1P07996 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
THBS1P07996 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
THBS1P07996 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
THBS1P07996 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
THBS1P07996 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
THBS1P07996 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC19.41■□□□□ 0.7
THBS1P07996 AL354811.1-201ENST00000610286 706 ntBASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms