Protein–RNA interactions for Protein: O60810

PRAMEF4, PRAME family member 4, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF4O60810 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
PRAMEF4O60810 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
PRAMEF4O60810 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
PRAMEF4O60810 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
PRAMEF4O60810 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
PRAMEF4O60810 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PRAMEF4O60810 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.39■□□□□ 0.85
PRAMEF4O60810 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
PRAMEF4O60810 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PRAMEF4O60810 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PRAMEF4O60810 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PRAMEF4O60810 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC20.39■□□□□ 0.85
PRAMEF4O60810 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PRAMEF4O60810 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.39■□□□□ 0.85
PRAMEF4O60810 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PRAMEF4O60810 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
PRAMEF4O60810 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.39■□□□□ 0.85
PRAMEF4O60810 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.39■□□□□ 0.85
PRAMEF4O60810 NARF-205ENST00000412079 1760 ntTSL 5 BASIC20.39■□□□□ 0.85
PRAMEF4O60810 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PRAMEF4O60810 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
PRAMEF4O60810 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC20.38■□□□□ 0.85
PRAMEF4O60810 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PRAMEF4O60810 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PRAMEF4O60810 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PRAMEF4O60810 AC027612.3-201ENST00000413684 1047 ntBASIC20.38■□□□□ 0.85
PRAMEF4O60810 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PRAMEF4O60810 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PRAMEF4O60810 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PRAMEF4O60810 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
PRAMEF4O60810 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PRAMEF4O60810 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PRAMEF4O60810 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PRAMEF4O60810 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PRAMEF4O60810 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC20.37■□□□□ 0.85
PRAMEF4O60810 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.37■□□□□ 0.85
PRAMEF4O60810 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.37■□□□□ 0.85
PRAMEF4O60810 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PRAMEF4O60810 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PRAMEF4O60810 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PRAMEF4O60810 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC20.37■□□□□ 0.85
PRAMEF4O60810 CPT2-209ENST00000636935 803 ntTSL 5 BASIC20.37■□□□□ 0.85
PRAMEF4O60810 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PRAMEF4O60810 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.37■□□□□ 0.85
PRAMEF4O60810 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PRAMEF4O60810 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PRAMEF4O60810 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PRAMEF4O60810 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
PRAMEF4O60810 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PRAMEF4O60810 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PRAMEF4O60810 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.36■□□□□ 0.85
PRAMEF4O60810 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PRAMEF4O60810 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.36■□□□□ 0.85
PRAMEF4O60810 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PRAMEF4O60810 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.36■□□□□ 0.85
PRAMEF4O60810 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PRAMEF4O60810 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC20.36■□□□□ 0.85
PRAMEF4O60810 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
PRAMEF4O60810 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PRAMEF4O60810 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
PRAMEF4O60810 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PRAMEF4O60810 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PRAMEF4O60810 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PRAMEF4O60810 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.35■□□□□ 0.85
PRAMEF4O60810 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
PRAMEF4O60810 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC20.35■□□□□ 0.85
PRAMEF4O60810 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC20.35■□□□□ 0.85
PRAMEF4O60810 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC20.35■□□□□ 0.85
PRAMEF4O60810 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC20.35■□□□□ 0.85
PRAMEF4O60810 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PRAMEF4O60810 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC20.35■□□□□ 0.85
PRAMEF4O60810 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PRAMEF4O60810 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PRAMEF4O60810 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
PRAMEF4O60810 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PRAMEF4O60810 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PRAMEF4O60810 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.34■□□□□ 0.85
PRAMEF4O60810 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
PRAMEF4O60810 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PRAMEF4O60810 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC20.34■□□□□ 0.85
PRAMEF4O60810 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC20.34■□□□□ 0.85
PRAMEF4O60810 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PRAMEF4O60810 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC20.34■□□□□ 0.85
PRAMEF4O60810 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC20.34■□□□□ 0.85
PRAMEF4O60810 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
PRAMEF4O60810 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PRAMEF4O60810 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PRAMEF4O60810 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PRAMEF4O60810 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PRAMEF4O60810 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.34■□□□□ 0.85
PRAMEF4O60810 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.34■□□□□ 0.85
PRAMEF4O60810 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
PRAMEF4O60810 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC20.34■□□□□ 0.85
PRAMEF4O60810 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PRAMEF4O60810 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PRAMEF4O60810 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.33■□□□□ 0.85
PRAMEF4O60810 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PRAMEF4O60810 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.85
PRAMEF4O60810 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PRAMEF4O60810 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms