Protein–RNA interactions for Protein: O14617

AP3D1, AP-3 complex subunit delta-1, humanhuman

Predictions only

Length 1,153 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1O14617 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
AP3D1O14617 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
AP3D1O14617 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
AP3D1O14617 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
AP3D1O14617 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
AP3D1O14617 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
AP3D1O14617 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC19.7■□□□□ 0.74
AP3D1O14617 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC19.7■□□□□ 0.74
AP3D1O14617 NALT1-201ENST00000429224 738 ntTSL 5 BASIC19.7■□□□□ 0.74
AP3D1O14617 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
AP3D1O14617 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
AP3D1O14617 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
AP3D1O14617 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
AP3D1O14617 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
AP3D1O14617 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
AP3D1O14617 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
AP3D1O14617 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
AP3D1O14617 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
AP3D1O14617 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
AP3D1O14617 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
AP3D1O14617 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
AP3D1O14617 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
AP3D1O14617 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC19.7■□□□□ 0.74
AP3D1O14617 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
AP3D1O14617 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.69■□□□□ 0.74
AP3D1O14617 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
AP3D1O14617 AC026471.6-201ENST00000622954 1905 ntBASIC19.69■□□□□ 0.74
AP3D1O14617 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
AP3D1O14617 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
AP3D1O14617 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.69■□□□□ 0.74
AP3D1O14617 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
AP3D1O14617 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC19.69■□□□□ 0.74
AP3D1O14617 AL034346.1-201ENST00000568244 1277 ntBASIC19.69■□□□□ 0.74
AP3D1O14617 GRAMD4P4-201ENST00000613563 1115 ntBASIC19.69■□□□□ 0.74
AP3D1O14617 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
AP3D1O14617 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.69■□□□□ 0.74
AP3D1O14617 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
AP3D1O14617 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC19.69■□□□□ 0.74
AP3D1O14617 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
AP3D1O14617 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
AP3D1O14617 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
AP3D1O14617 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.68■□□□□ 0.74
AP3D1O14617 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.68■□□□□ 0.74
AP3D1O14617 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC19.68■□□□□ 0.74
AP3D1O14617 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.68■□□□□ 0.74
AP3D1O14617 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
AP3D1O14617 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
AP3D1O14617 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
AP3D1O14617 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
AP3D1O14617 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC19.68■□□□□ 0.74
AP3D1O14617 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC19.68■□□□□ 0.74
AP3D1O14617 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
AP3D1O14617 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC19.68■□□□□ 0.74
AP3D1O14617 AC126544.1-201ENST00000580842 1059 ntBASIC19.68■□□□□ 0.74
AP3D1O14617 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
AP3D1O14617 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
AP3D1O14617 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC19.68■□□□□ 0.74
AP3D1O14617 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
AP3D1O14617 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.67■□□□□ 0.74
AP3D1O14617 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
AP3D1O14617 AC099791.1-201ENST00000416440 715 ntBASIC19.67■□□□□ 0.74
AP3D1O14617 AP001330.3-201ENST00000520123 633 ntBASIC19.67■□□□□ 0.74
AP3D1O14617 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC19.67■□□□□ 0.74
AP3D1O14617 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
AP3D1O14617 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
AP3D1O14617 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
AP3D1O14617 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
AP3D1O14617 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
AP3D1O14617 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.66■□□□□ 0.74
AP3D1O14617 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
AP3D1O14617 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.66■□□□□ 0.74
AP3D1O14617 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
AP3D1O14617 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
AP3D1O14617 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
AP3D1O14617 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
AP3D1O14617 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
AP3D1O14617 AC133561.4-201ENST00000566112 224 ntBASIC19.66■□□□□ 0.74
AP3D1O14617 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC19.66■□□□□ 0.74
AP3D1O14617 MAG-206ENST00000597035 542 ntTSL 4 BASIC19.66■□□□□ 0.74
AP3D1O14617 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
AP3D1O14617 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
AP3D1O14617 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
AP3D1O14617 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
AP3D1O14617 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
AP3D1O14617 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
AP3D1O14617 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.66■□□□□ 0.74
AP3D1O14617 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
AP3D1O14617 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.66■□□□□ 0.74
AP3D1O14617 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.66■□□□□ 0.74
AP3D1O14617 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
AP3D1O14617 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
AP3D1O14617 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
AP3D1O14617 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
AP3D1O14617 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
AP3D1O14617 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
AP3D1O14617 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.65■□□□□ 0.74
AP3D1O14617 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.64■□□□□ 0.74
AP3D1O14617 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
AP3D1O14617 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
AP3D1O14617 AC005229.4-201ENST00000610085 2198 ntBASIC19.64■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms