Protein–RNA interactions for Protein: O00555

CACNA1A, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, humanhuman

Predictions only

Length 2,505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1AO00555 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC20.29■□□□□ 0.84
CACNA1AO00555 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CACNA1AO00555 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC20.29■□□□□ 0.84
CACNA1AO00555 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CACNA1AO00555 DUX4L26-201ENST00000489078 1255 ntBASIC20.29■□□□□ 0.84
CACNA1AO00555 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC20.29■□□□□ 0.84
CACNA1AO00555 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.29■□□□□ 0.84
CACNA1AO00555 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CACNA1AO00555 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CACNA1AO00555 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.28■□□□□ 0.84
CACNA1AO00555 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CACNA1AO00555 KRT18P48-201ENST00000434763 852 ntBASIC20.28■□□□□ 0.84
CACNA1AO00555 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CACNA1AO00555 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CACNA1AO00555 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC20.28■□□□□ 0.84
CACNA1AO00555 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CACNA1AO00555 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CACNA1AO00555 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CACNA1AO00555 FXN-202ENST00000396364 980 ntTSL 5 BASIC20.28■□□□□ 0.84
CACNA1AO00555 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC20.28■□□□□ 0.84
CACNA1AO00555 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC20.28■□□□□ 0.84
CACNA1AO00555 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC20.28■□□□□ 0.84
CACNA1AO00555 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC20.28■□□□□ 0.84
CACNA1AO00555 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC20.28■□□□□ 0.84
CACNA1AO00555 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC20.28■□□□□ 0.84
CACNA1AO00555 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC20.28■□□□□ 0.84
CACNA1AO00555 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CACNA1AO00555 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CACNA1AO00555 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.27■□□□□ 0.84
CACNA1AO00555 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CACNA1AO00555 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CACNA1AO00555 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC20.27■□□□□ 0.84
CACNA1AO00555 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC20.27■□□□□ 0.84
CACNA1AO00555 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.27■□□□□ 0.84
CACNA1AO00555 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
CACNA1AO00555 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CACNA1AO00555 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CACNA1AO00555 PBX1-209ENST00000485769 834 ntTSL 2 BASIC20.27■□□□□ 0.84
CACNA1AO00555 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC20.27■□□□□ 0.84
CACNA1AO00555 AC087388.1-201ENST00000571370 1112 ntBASIC20.27■□□□□ 0.84
CACNA1AO00555 AC026471.5-201ENST00000615068 467 ntBASIC20.27■□□□□ 0.84
CACNA1AO00555 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CACNA1AO00555 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
CACNA1AO00555 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.27■□□□□ 0.83
CACNA1AO00555 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CACNA1AO00555 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
CACNA1AO00555 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
CACNA1AO00555 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.26■□□□□ 0.83
CACNA1AO00555 CFL2-205ENST00000555765 632 ntTSL 2 BASIC20.26■□□□□ 0.83
CACNA1AO00555 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC20.26■□□□□ 0.83
CACNA1AO00555 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC20.26■□□□□ 0.83
CACNA1AO00555 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CACNA1AO00555 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
CACNA1AO00555 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
CACNA1AO00555 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
CACNA1AO00555 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CACNA1AO00555 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
CACNA1AO00555 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CACNA1AO00555 ISCU-203ENST00000431221 799 ntTSL 2 BASIC20.26■□□□□ 0.83
CACNA1AO00555 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CACNA1AO00555 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
CACNA1AO00555 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC20.26■□□□□ 0.83
CACNA1AO00555 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CACNA1AO00555 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CACNA1AO00555 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CACNA1AO00555 AL355472.2-201ENST00000422958 438 ntBASIC20.25■□□□□ 0.83
CACNA1AO00555 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC20.25■□□□□ 0.83
CACNA1AO00555 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CACNA1AO00555 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
CACNA1AO00555 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC20.25■□□□□ 0.83
CACNA1AO00555 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
CACNA1AO00555 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CACNA1AO00555 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC20.25■□□□□ 0.83
CACNA1AO00555 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CACNA1AO00555 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
CACNA1AO00555 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC20.25■□□□□ 0.83
CACNA1AO00555 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC20.25■□□□□ 0.83
CACNA1AO00555 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.25■□□□□ 0.83
CACNA1AO00555 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CACNA1AO00555 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CACNA1AO00555 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.25■□□□□ 0.83
CACNA1AO00555 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC20.24■□□□□ 0.83
CACNA1AO00555 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.24■□□□□ 0.83
CACNA1AO00555 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC20.24■□□□□ 0.83
CACNA1AO00555 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
CACNA1AO00555 KRT16P2-201ENST00000414673 1423 ntBASIC20.24■□□□□ 0.83
CACNA1AO00555 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC20.24■□□□□ 0.83
CACNA1AO00555 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC20.24■□□□□ 0.83
CACNA1AO00555 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC20.24■□□□□ 0.83
CACNA1AO00555 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CACNA1AO00555 Six3os1_6.1-201ENST00000620790 196 ntBASIC20.24■□□□□ 0.83
CACNA1AO00555 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC20.24■□□□□ 0.83
CACNA1AO00555 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC20.24■□□□□ 0.83
CACNA1AO00555 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CACNA1AO00555 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC20.23■□□□□ 0.83
CACNA1AO00555 LY6E-205ENST00000519611 635 ntTSL 3 BASIC20.23■□□□□ 0.83
CACNA1AO00555 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC20.23■□□□□ 0.83
CACNA1AO00555 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC20.23■□□□□ 0.83
CACNA1AO00555 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CACNA1AO00555 KRT8P9-201ENST00000558927 1449 ntBASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms