Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.76■□□□□ 0.91
CDC7O00311 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
CDC7O00311 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC20.76■□□□□ 0.91
CDC7O00311 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDC7O00311 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDC7O00311 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CDC7O00311 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDC7O00311 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
CDC7O00311 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CDC7O00311 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
CDC7O00311 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
CDC7O00311 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.75■□□□□ 0.91
CDC7O00311 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDC7O00311 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.75■□□□□ 0.91
CDC7O00311 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.75■□□□□ 0.91
CDC7O00311 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CDC7O00311 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDC7O00311 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.75■□□□□ 0.91
CDC7O00311 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDC7O00311 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDC7O00311 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC20.75■□□□□ 0.91
CDC7O00311 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
CDC7O00311 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC20.75■□□□□ 0.91
CDC7O00311 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC20.75■□□□□ 0.91
CDC7O00311 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDC7O00311 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.75■□□□□ 0.91
CDC7O00311 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDC7O00311 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
CDC7O00311 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.75■□□□□ 0.91
CDC7O00311 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDC7O00311 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC20.75■□□□□ 0.91
CDC7O00311 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDC7O00311 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDC7O00311 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC20.74■□□□□ 0.91
CDC7O00311 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDC7O00311 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDC7O00311 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
CDC7O00311 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
CDC7O00311 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC20.74■□□□□ 0.91
CDC7O00311 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC20.74■□□□□ 0.91
CDC7O00311 STOX2-205ENST00000513034 807 ntTSL 3 BASIC20.74■□□□□ 0.91
CDC7O00311 AC005837.3-201ENST00000612163 286 ntBASIC20.74■□□□□ 0.91
CDC7O00311 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CDC7O00311 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.74■□□□□ 0.91
CDC7O00311 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CDC7O00311 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDC7O00311 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDC7O00311 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDC7O00311 AC012414.1-201ENST00000556676 535 ntBASIC20.73■□□□□ 0.91
CDC7O00311 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC20.73■□□□□ 0.91
CDC7O00311 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDC7O00311 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDC7O00311 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.73■□□□□ 0.91
CDC7O00311 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
CDC7O00311 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
CDC7O00311 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDC7O00311 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDC7O00311 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDC7O00311 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDC7O00311 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CDC7O00311 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CDC7O00311 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CDC7O00311 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CDC7O00311 HYI-206ENST00000372434 1025 ntTSL 5 BASIC20.72■□□□□ 0.91
CDC7O00311 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CDC7O00311 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDC7O00311 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDC7O00311 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDC7O00311 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDC7O00311 MPST-204ENST00000404393 1329 ntTSL 5 BASIC20.72■□□□□ 0.91
CDC7O00311 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
CDC7O00311 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC20.72■□□□□ 0.91
CDC7O00311 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDC7O00311 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CDC7O00311 RHOF-204ENST00000537265 699 ntTSL 2 BASIC20.71■□□□□ 0.91
CDC7O00311 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC20.71■□□□□ 0.91
CDC7O00311 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
CDC7O00311 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDC7O00311 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDC7O00311 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDC7O00311 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDC7O00311 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.71■□□□□ 0.91
CDC7O00311 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.7■□□□□ 0.9
CDC7O00311 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CDC7O00311 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDC7O00311 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CDC7O00311 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CDC7O00311 NARF-205ENST00000412079 1760 ntTSL 5 BASIC20.7■□□□□ 0.9
CDC7O00311 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.7■□□□□ 0.9
CDC7O00311 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDC7O00311 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC20.7■□□□□ 0.9
CDC7O00311 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CDC7O00311 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC20.7■□□□□ 0.9
CDC7O00311 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CDC7O00311 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC20.7■□□□□ 0.9
CDC7O00311 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CDC7O00311 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDC7O00311 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDC7O00311 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDC7O00311 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms