Protein–RNA interactions for Protein: A6NNA2

SRRM3, Serine/arginine repetitive matrix protein 3, humanhuman

Predicted RBP Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3A6NNA2 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
SRRM3A6NNA2 AC144652.1-201ENST00000609974 1624 ntBASIC21.82■■□□□ 1.08
SRRM3A6NNA2 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SRRM3A6NNA2 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC21.82■■□□□ 1.08
SRRM3A6NNA2 GXYLT1P5-201ENST00000614548 1189 ntBASIC21.82■■□□□ 1.08
SRRM3A6NNA2 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC21.82■■□□□ 1.08
SRRM3A6NNA2 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SRRM3A6NNA2 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC21.82■■□□□ 1.08
SRRM3A6NNA2 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SRRM3A6NNA2 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC21.81■■□□□ 1.08
SRRM3A6NNA2 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
SRRM3A6NNA2 NME4-202ENST00000382940 766 ntTSL 3 BASIC21.81■■□□□ 1.08
SRRM3A6NNA2 NME4-211ENST00000620944 1193 ntTSL 2 BASIC21.81■■□□□ 1.08
SRRM3A6NNA2 AC245100.8-202ENST00000629247 1058 ntBASIC21.81■■□□□ 1.08
SRRM3A6NNA2 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
SRRM3A6NNA2 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
SRRM3A6NNA2 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC21.81■■□□□ 1.08
SRRM3A6NNA2 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SRRM3A6NNA2 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SRRM3A6NNA2 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SRRM3A6NNA2 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
SRRM3A6NNA2 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
SRRM3A6NNA2 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SRRM3A6NNA2 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
SRRM3A6NNA2 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC21.8■■□□□ 1.08
SRRM3A6NNA2 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC21.8■■□□□ 1.08
SRRM3A6NNA2 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC21.8■■□□□ 1.08
SRRM3A6NNA2 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SRRM3A6NNA2 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SRRM3A6NNA2 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SRRM3A6NNA2 FEM1AP1-201ENST00000431297 1995 ntBASIC21.79■■□□□ 1.08
SRRM3A6NNA2 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
SRRM3A6NNA2 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SRRM3A6NNA2 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SRRM3A6NNA2 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SRRM3A6NNA2 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SRRM3A6NNA2 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC21.79■■□□□ 1.08
SRRM3A6NNA2 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC21.79■■□□□ 1.08
SRRM3A6NNA2 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SRRM3A6NNA2 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SRRM3A6NNA2 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC21.79■■□□□ 1.08
SRRM3A6NNA2 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC21.79■■□□□ 1.08
SRRM3A6NNA2 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC21.79■■□□□ 1.08
SRRM3A6NNA2 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC21.79■■□□□ 1.08
SRRM3A6NNA2 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
SRRM3A6NNA2 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SRRM3A6NNA2 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
SRRM3A6NNA2 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SRRM3A6NNA2 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
SRRM3A6NNA2 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SRRM3A6NNA2 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SRRM3A6NNA2 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
SRRM3A6NNA2 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SRRM3A6NNA2 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
SRRM3A6NNA2 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SRRM3A6NNA2 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SRRM3A6NNA2 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC21.78■■□□□ 1.08
SRRM3A6NNA2 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC21.78■■□□□ 1.08
SRRM3A6NNA2 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC21.78■■□□□ 1.08
SRRM3A6NNA2 AC123595.1-201ENST00000440769 1046 ntBASIC21.78■■□□□ 1.08
SRRM3A6NNA2 NTF6G-201ENST00000591094 616 ntBASIC21.78■■□□□ 1.08
SRRM3A6NNA2 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SRRM3A6NNA2 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SRRM3A6NNA2 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
SRRM3A6NNA2 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC21.78■■□□□ 1.08
SRRM3A6NNA2 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
SRRM3A6NNA2 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC21.78■■□□□ 1.08
SRRM3A6NNA2 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC21.78■■□□□ 1.08
SRRM3A6NNA2 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC21.77■■□□□ 1.08
SRRM3A6NNA2 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
SRRM3A6NNA2 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SRRM3A6NNA2 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SRRM3A6NNA2 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC21.77■■□□□ 1.08
SRRM3A6NNA2 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SRRM3A6NNA2 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SRRM3A6NNA2 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SRRM3A6NNA2 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SRRM3A6NNA2 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC21.77■■□□□ 1.08
SRRM3A6NNA2 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SRRM3A6NNA2 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SRRM3A6NNA2 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SRRM3A6NNA2 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC21.77■■□□□ 1.08
SRRM3A6NNA2 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SRRM3A6NNA2 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.07
SRRM3A6NNA2 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.07
SRRM3A6NNA2 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.07
SRRM3A6NNA2 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
SRRM3A6NNA2 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC21.76■■□□□ 1.07
SRRM3A6NNA2 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
SRRM3A6NNA2 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
SRRM3A6NNA2 ME3-201ENST00000323418 1068 ntTSL 5 BASIC21.76■■□□□ 1.07
SRRM3A6NNA2 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
SRRM3A6NNA2 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC21.76■■□□□ 1.07
SRRM3A6NNA2 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SRRM3A6NNA2 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
SRRM3A6NNA2 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC21.76■■□□□ 1.07
SRRM3A6NNA2 AC136469.2-201ENST00000623944 1028 ntBASIC21.76■■□□□ 1.07
SRRM3A6NNA2 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
SRRM3A6NNA2 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SRRM3A6NNA2 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC21.76■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms