Protein–RNA interactions for Protein: A0A0K0K1A3

TRBV10-1, T-cell receptor beta variable 10-1(gene/pseudogene) (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV10-1A0A0K0K1A3 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRBV10-1A0A0K0K1A3 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC14.91□□□□□ -0.02
TRBV10-1A0A0K0K1A3 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRBV10-1A0A0K0K1A3 UNC93B3-201ENST00000308076 687 ntBASIC14.91□□□□□ -0.02
TRBV10-1A0A0K0K1A3 IGHV3-19-201ENST00000521488 291 ntBASIC14.91□□□□□ -0.02
TRBV10-1A0A0K0K1A3 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC14.91□□□□□ -0.02
TRBV10-1A0A0K0K1A3 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC14.91□□□□□ -0.02
TRBV10-1A0A0K0K1A3 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC14.91□□□□□ -0.02
TRBV10-1A0A0K0K1A3 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC14.91□□□□□ -0.02
TRBV10-1A0A0K0K1A3 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRBV10-1A0A0K0K1A3 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
TRBV10-1A0A0K0K1A3 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC14.91□□□□□ -0.02
TRBV10-1A0A0K0K1A3 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRBV10-1A0A0K0K1A3 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRBV10-1A0A0K0K1A3 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRBV10-1A0A0K0K1A3 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRBV10-1A0A0K0K1A3 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRBV10-1A0A0K0K1A3 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
TRBV10-1A0A0K0K1A3 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TRBV10-1A0A0K0K1A3 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRBV10-1A0A0K0K1A3 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC14.9□□□□□ -0.02
TRBV10-1A0A0K0K1A3 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TRBV10-1A0A0K0K1A3 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TRBV10-1A0A0K0K1A3 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC14.9□□□□□ -0.02
TRBV10-1A0A0K0K1A3 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRBV10-1A0A0K0K1A3 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRBV10-1A0A0K0K1A3 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRBV10-1A0A0K0K1A3 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TRBV10-1A0A0K0K1A3 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC14.9□□□□□ -0.02
TRBV10-1A0A0K0K1A3 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TRBV10-1A0A0K0K1A3 AL136162.1-201ENST00000607711 1078 ntBASIC14.9□□□□□ -0.02
TRBV10-1A0A0K0K1A3 MPST-208ENST00000628507 698 ntTSL 5 BASIC14.9□□□□□ -0.02
TRBV10-1A0A0K0K1A3 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TRBV10-1A0A0K0K1A3 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRBV10-1A0A0K0K1A3 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRBV10-1A0A0K0K1A3 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRBV10-1A0A0K0K1A3 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRBV10-1A0A0K0K1A3 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC14.9□□□□□ -0.02
TRBV10-1A0A0K0K1A3 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
TRBV10-1A0A0K0K1A3 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC14.9□□□□□ -0.02
TRBV10-1A0A0K0K1A3 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRBV10-1A0A0K0K1A3 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRBV10-1A0A0K0K1A3 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRBV10-1A0A0K0K1A3 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC14.9□□□□□ -0.02
TRBV10-1A0A0K0K1A3 AC135279.3-201ENST00000610945 1311 ntBASIC14.9□□□□□ -0.02
TRBV10-1A0A0K0K1A3 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TRBV10-1A0A0K0K1A3 AF106564.1-201ENST00000607058 2553 ntBASIC14.89□□□□□ -0.03
TRBV10-1A0A0K0K1A3 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TRBV10-1A0A0K0K1A3 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRBV10-1A0A0K0K1A3 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRBV10-1A0A0K0K1A3 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRBV10-1A0A0K0K1A3 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRBV10-1A0A0K0K1A3 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRBV10-1A0A0K0K1A3 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TRBV10-1A0A0K0K1A3 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC14.89□□□□□ -0.03
TRBV10-1A0A0K0K1A3 FXN-202ENST00000396364 980 ntTSL 5 BASIC14.89□□□□□ -0.03
TRBV10-1A0A0K0K1A3 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC14.89□□□□□ -0.03
TRBV10-1A0A0K0K1A3 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TRBV10-1A0A0K0K1A3 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC14.89□□□□□ -0.03
TRBV10-1A0A0K0K1A3 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC14.89□□□□□ -0.03
TRBV10-1A0A0K0K1A3 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
TRBV10-1A0A0K0K1A3 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRBV10-1A0A0K0K1A3 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TRBV10-1A0A0K0K1A3 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
TRBV10-1A0A0K0K1A3 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRBV10-1A0A0K0K1A3 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
TRBV10-1A0A0K0K1A3 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC14.88□□□□□ -0.03
TRBV10-1A0A0K0K1A3 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC14.88□□□□□ -0.03
TRBV10-1A0A0K0K1A3 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TRBV10-1A0A0K0K1A3 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRBV10-1A0A0K0K1A3 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC14.88□□□□□ -0.03
TRBV10-1A0A0K0K1A3 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC14.88□□□□□ -0.03
TRBV10-1A0A0K0K1A3 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TRBV10-1A0A0K0K1A3 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC14.88□□□□□ -0.03
TRBV10-1A0A0K0K1A3 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC14.88□□□□□ -0.03
TRBV10-1A0A0K0K1A3 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC14.88□□□□□ -0.03
TRBV10-1A0A0K0K1A3 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
TRBV10-1A0A0K0K1A3 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
TRBV10-1A0A0K0K1A3 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TRBV10-1A0A0K0K1A3 NARF-205ENST00000412079 1760 ntTSL 5 BASIC14.88□□□□□ -0.03
TRBV10-1A0A0K0K1A3 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRBV10-1A0A0K0K1A3 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC14.88□□□□□ -0.03
TRBV10-1A0A0K0K1A3 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRBV10-1A0A0K0K1A3 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRBV10-1A0A0K0K1A3 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRBV10-1A0A0K0K1A3 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRBV10-1A0A0K0K1A3 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRBV10-1A0A0K0K1A3 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRBV10-1A0A0K0K1A3 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRBV10-1A0A0K0K1A3 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRBV10-1A0A0K0K1A3 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRBV10-1A0A0K0K1A3 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
TRBV10-1A0A0K0K1A3 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
TRBV10-1A0A0K0K1A3 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC14.87□□□□□ -0.03
TRBV10-1A0A0K0K1A3 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRBV10-1A0A0K0K1A3 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRBV10-1A0A0K0K1A3 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
TRBV10-1A0A0K0K1A3 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRBV10-1A0A0K0K1A3 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRBV10-1A0A0K0K1A3 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms