Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 HNRNPCL1-201ENST00000317869 1108 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
P04436 ARL6IP4-202ENST00000357866 546 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
P04436 PPP1R7-206ENST00000406106 965 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
P04436 AC008440.3-201ENST00000422045 555 ntTSL 4 BASIC10.11□□□□□ -0.79
P04436 AL512326.3-201ENST00000424885 171 ntBASIC10.11□□□□□ -0.79
P04436 GHRL-205ENST00000429122 793 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
P04436 PRRX2-AS1-201ENST00000440413 429 ntTSL 2 BASIC10.11□□□□□ -0.79
P04436 KIZ-AS1-202ENST00000443753 1161 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
P04436 AL513365.1-201ENST00000446498 535 ntBASIC10.11□□□□□ -0.79
P04436 ZSCAN2-207ENST00000448803 3813 ntAPPRIS P2 TSL 5 BASIC10.11□□□□□ -0.79
P04436 MRPL45P1-201ENST00000449328 914 ntBASIC10.11□□□□□ -0.79
P04436 GHRL-211ENST00000457360 855 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
P04436 AC090955.1-201ENST00000458338 235 ntBASIC10.11□□□□□ -0.79
P04436 AP003551.1-201ENST00000495884 574 ntBASIC10.11□□□□□ -0.79
P04436 LINC01021-203ENST00000510165 1106 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
P04436 FAM85B-201ENST00000519726 792 ntTSL 5 BASIC10.11□□□□□ -0.79
P04436 DDIT3-202ENST00000547303 872 ntAPPRIS P1 TSL 2 BASIC10.11□□□□□ -0.79
P04436 AC079905.2-201ENST00000550105 247 ntBASIC10.11□□□□□ -0.79
P04436 LINC02320-201ENST00000557778 454 ntTSL 3 BASIC10.11□□□□□ -0.79
P04436 AC093249.2-201ENST00000563540 482 ntTSL 3 BASIC10.11□□□□□ -0.79
P04436 AP005137.1-201ENST00000586453 568 ntTSL 4 BASIC10.11□□□□□ -0.79
P04436 TBC1D28-202ENST00000405044 1978 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
P04436 MECP2-201ENST00000303391 10505 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
P04436 VDR-208ENST00000550325 3925 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
P04436 AL031283.1-201ENST00000427824 5178 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
P04436 LEXM-202ENST00000371273 1651 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
P04436 CCT6B-202ENST00000421975 1680 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
P04436 MUC20P1-201ENST00000457750 1680 ntBASIC10.11□□□□□ -0.79
P04436 TCP11-226ENST00000512012 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
P04436 ANKRD62-202ENST00000587848 2919 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
P04436 PITRM1-202ENST00000380989 3487 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
P04436 AC008555.2-202ENST00000601776 5302 ntTSL 2 BASIC10.11□□□□□ -0.79
P04436 SGPL1-202ENST00000373202 5745 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
P04436 C17orf53-202ENST00000319977 2725 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
P04436 CTSC-203ENST00000524463 6125 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
P04436 DLAT-202ENST00000393051 3517 ntTSL 5 BASIC10.11□□□□□ -0.79
P04436 TEKT3-201ENST00000338696 1630 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
P04436 SOX9-201ENST00000245479 3935 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
P04436 MASP1-203ENST00000337774 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
P04436 RIMS2-202ENST00000339750 3780 ntTSL 3 BASIC10.11□□□□□ -0.79
P04436 RAB11FIP3-205ENST00000450428 3203 ntTSL 2 BASIC10.11□□□□□ -0.79
P04436 TECPR2-201ENST00000359520 8686 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
P04436 LINC01254-201ENST00000566225 2908 ntBASIC10.1□□□□□ -0.79
P04436 MYPN-203ENST00000373675 2126 ntTSL 2 BASIC10.1□□□□□ -0.79
P04436 TMEM18-201ENST00000281017 2762 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
P04436 CICP27-201ENST00000442987 3812 ntBASIC10.1□□□□□ -0.79
P04436 POLR3B-201ENST00000228347 4273 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
P04436 TMEM116-215ENST00000552374 1408 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
P04436 BAZ2A-211ENST00000549884 6050 ntAPPRIS ALT2 TSL 2 BASIC10.1□□□□□ -0.79
P04436 ALS2CL-203ENST00000415953 3471 ntAPPRIS P1 TSL 2 BASIC10.1□□□□□ -0.79
P04436 FXR1-202ENST00000357559 8711 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
P04436 CD300A-201ENST00000310828 631 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
P04436 C11orf42-201ENST00000316375 1142 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
P04436 S100A1-203ENST00000368698 784 ntTSL 2 BASIC10.1□□□□□ -0.79
P04436 STK16-205ENST00000409743 1069 ntTSL 5 BASIC10.1□□□□□ -0.79
P04436 Z82196.1-201ENST00000423712 768 ntTSL 3 BASIC10.1□□□□□ -0.79
P04436 CXorf40A-206ENST00000428236 887 ntTSL 3 BASIC10.1□□□□□ -0.79
P04436 MIR3681HG-203ENST00000429878 558 ntTSL 2 BASIC10.1□□□□□ -0.79
P04436 AL139220.1-201ENST00000436802 520 ntBASIC10.1□□□□□ -0.79
P04436 ARHGEF26-AS1-202ENST00000479270 595 ntTSL 4 BASIC10.1□□□□□ -0.79
P04436 BTF3L4-205ENST00000489308 794 ntTSL 2 BASIC10.1□□□□□ -0.79
P04436 ASB5-205ENST00000512254 1036 ntTSL 2 BASIC10.1□□□□□ -0.79
P04436 AP001208.2-201ENST00000519793 578 ntTSL 4 BASIC10.1□□□□□ -0.79
P04436 Metazoa_SRP.51-201ENST00000570437 272 ntBASIC10.1□□□□□ -0.79
P04436 AL031587.3-201ENST00000609976 814 ntBASIC10.1□□□□□ -0.79
P04436 AC137803.1-201ENST00000611162 263 ntBASIC10.1□□□□□ -0.79
P04436 pRNA.10-201ENST00000613590 89 ntBASIC10.1□□□□□ -0.79
P04436 Metazoa_SRP.185-201ENST00000615776 260 ntBASIC10.1□□□□□ -0.79
P04436 AC012183.1-201ENST00000625197 499 ntBASIC10.1□□□□□ -0.79
P04436 AC073488.10-201ENST00000633241 778 ntBASIC10.1□□□□□ -0.79
P04436 HNRNPUL1-202ENST00000352456 3426 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
P04436 AMBN-201ENST00000322937 2005 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
P04436 C14orf132-203ENST00000555004 7583 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
P04436 TDRD3-201ENST00000196169 3019 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
P04436 MRAS-201ENST00000289104 4538 ntAPPRIS P1 TSL 2 BASIC10.1□□□□□ -0.79
P04436 PCDHGC5-201ENST00000252087 4761 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
P04436 PJA1-204ENST00000374584 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
P04436 SRD5A3-AS1-201ENST00000433175 1617 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
P04436 IFFO1-205ENST00000436152 3101 ntTSL 2 BASIC10.1□□□□□ -0.79
P04436 LRRC37A7P-202ENST00000585232 1394 ntBASIC10.1□□□□□ -0.79
P04436 PITX2-213ENST00000616641 3102 ntTSL 5 BASIC10.1□□□□□ -0.79
P04436 PTCH2-201ENST00000372192 4225 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
P04436 OSBP2-203ENST00000403222 3728 ntTSL 5 BASIC10.1□□□□□ -0.79
P04436 GRIK1-204ENST00000399907 3472 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
P04436 DENND2A-210ENST00000537639 3452 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
P04436 ZFYVE27-203ENST00000359980 2997 ntAPPRIS ALT1 TSL 2 BASIC10.1□□□□□ -0.79
P04436 TFIP11-204ENST00000407690 3586 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
P04436 LINC01234-201ENST00000510694 1467 ntTSL 2 BASIC10.1□□□□□ -0.79
P04436 ZNF133-214ENST00000628216 2318 ntAPPRIS ALT2 TSL 2 BASIC10.1□□□□□ -0.79
P04436 PARD3B-202ENST00000351153 3411 ntAPPRIS P4 TSL 1 (best) BASIC10.1□□□□□ -0.79
P04436 PROM1-207ENST00000508167 4014 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
P04436 LHX6-203ENST00000373755 3384 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
P04436 AL391421.1-201ENST00000372387 1922 ntTSL 2 BASIC10.09□□□□□ -0.79
P04436 PHTF2-203ENST00000307305 4793 ntAPPRIS ALT1 TSL 1 (best) BASIC10.09□□□□□ -0.79
P04436 LINC01166-201ENST00000443633 2619 ntTSL 2 BASIC10.09□□□□□ -0.79
P04436 HDAC6-203ENST00000376619 4179 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
P04436 RAB3GAP2-202ENST00000358951 7257 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
P04436 TAF8-201ENST00000372977 6680 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
P04436 TBCEL-202ENST00000422003 5142 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
P04436 CCDC122-201ENST00000444614 2009 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms