RNA–Protein interactions for RNA: ENST00000228347.8

POLR3B-201, Transcript of RNA polymerase III subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene POLR3B, Length 4,273 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3B-201ENST00000228347 NISCHQ9Y2I1 1504 aa19.63■□□□□ 0.73
POLR3B-201ENST00000228347 DCAF8L2P0C7V8 631 aa19.32■□□□□ 0.68
POLR3B-201ENST00000228347 SUPT5HO00267 1087 aaKnown RBP18.16■□□□□ 0.5
POLR3B-201ENST00000228347 SHROOM4Q9ULL8 1493 aa18.12■□□□□ 0.49
POLR3B-201ENST00000228347 EHMT2Q96KQ7 1210 aa17.26■□□□□ 0.35
POLR3B-201ENST00000228347 FAM9AQ8IZU1 332 aaPredicted RBP17.04■□□□□ 0.32
POLR3B-201ENST00000228347 APLP2Q06481 763 aa16.91■□□□□ 0.3
POLR3B-201ENST00000228347 ABCC9O60706 1549 aa16.9■□□□□ 0.3
POLR3B-201ENST00000228347 TRIM41Q8WV44 630 aa16.9■□□□□ 0.3
POLR3B-201ENST00000228347 RANGAP1P46060 587 aaPredicted RBP16.66■□□□□ 0.26
POLR3B-201ENST00000228347 TTBK1Q5TCY1 1321 aaPredicted RBP16.61■□□□□ 0.25
POLR3B-201ENST00000228347 UBTFP17480 764 aaKnown RBP16.6■□□□□ 0.25
POLR3B-201ENST00000228347 PABPN1Q86U42 306 aaKnown RBP eCLIP16.58■□□□□ 0.25
POLR3B-201ENST00000228347 ATP1B4Q9UN42 357 aaPredicted RBP16.48■□□□□ 0.23
POLR3B-201ENST00000228347 PCGF6Q9BYE7 350 aa16.46■□□□□ 0.23
POLR3B-201ENST00000228347 CHIC1Q5VXU3 224 aa16.35■□□□□ 0.21
POLR3B-201ENST00000228347 CCDC180Q9P1Z9 1646 aa16.31■□□□□ 0.2
POLR3B-201ENST00000228347 ZCCHC6Q5VYS8 1495 aaKnown RBP16.26■□□□□ 0.19
POLR3B-201ENST00000228347 CCER1Q8TC90 406 aaPredicted RBP16.16■□□□□ 0.18
POLR3B-201ENST00000228347 LOC105371045A0A1W2PR82 267 aa16.16■□□□□ 0.18
POLR3B-201ENST00000228347 PPARGC1BQ86YN6 1023 aaKnown RBP16.14■□□□□ 0.17
POLR3B-201ENST00000228347 SCRIBQ14160 1630 aa16.1■□□□□ 0.17
POLR3B-201ENST00000228347 ZEB1P37275 1124 aaPredicted RBP16.08■□□□□ 0.16
POLR3B-201ENST00000228347 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.05■□□□□ 0.16
POLR3B-201ENST00000228347 HNRNPUL2Q1KMD3 747 aaKnown RBP16.05■□□□□ 0.16
POLR3B-201ENST00000228347 TRIM26Q12899 539 aaPredicted RBP15.97■□□□□ 0.15
POLR3B-201ENST00000228347 RB1CC1Q8TDY2 1594 aa15.91■□□□□ 0.14
POLR3B-201ENST00000228347 ITGAEP38570 1179 aa15.91■□□□□ 0.14
POLR3B-201ENST00000228347 MYT1LQ9UL68 1186 aa15.83■□□□□ 0.13
POLR3B-201ENST00000228347 NACADO15069 1562 aa15.81■□□□□ 0.12
POLR3B-201ENST00000228347 PELP1Q8IZL8 1130 aaKnown RBP15.8■□□□□ 0.12
POLR3B-201ENST00000228347 FBLN2P98095 1184 aa15.76■□□□□ 0.11
POLR3B-201ENST00000228347 CSRNP3Q8WYN3 585 aa15.73■□□□□ 0.11
POLR3B-201ENST00000228347 CENPBP07199 599 aaPredicted RBP15.64■□□□□ 0.09
POLR3B-201ENST00000228347 DCAF1Q9Y4B6 1507 aa15.63■□□□□ 0.09
POLR3B-201ENST00000228347 FAM50AQ14320 339 aaKnown RBP15.62■□□□□ 0.09
POLR3B-201ENST00000228347 RSF1Q96T23 1441 aaPredicted RBP15.59■□□□□ 0.09
POLR3B-201ENST00000228347 P3H3Q8IVL6 736 aa15.56■□□□□ 0.08
POLR3B-201ENST00000228347 HRCP23327 699 aa15.55■□□□□ 0.08
POLR3B-201ENST00000228347 POLR3GLQ9BT43 218 aa15.46■□□□□ 0.07
POLR3B-201ENST00000228347 BAZ1BQ9UIG0 1483 aaKnown RBP15.45■□□□□ 0.06
POLR3B-201ENST00000228347 ARID3CA6NKF2 412 aa15.44■□□□□ 0.06
POLR3B-201ENST00000228347 TRIM52Q96A61 297 aa15.44■□□□□ 0.06
POLR3B-201ENST00000228347 YTHDC1Q96MU7 727 aaKnown RBP15.43■□□□□ 0.06
POLR3B-201ENST00000228347 BAZ1AQ9NRL2 1556 aaPredicted RBP15.42■□□□□ 0.06
POLR3B-201ENST00000228347 CECR2Q9BXF3 1484 aa15.39■□□□□ 0.05
POLR3B-201ENST00000228347 CDK11AQ9UQ88 783 aaPredicted RBP15.37■□□□□ 0.05
POLR3B-201ENST00000228347 NEFLP07196 543 aa15.34■□□□□ 0.05
POLR3B-201ENST00000228347 NEUROD1Q13562 356 aa15.3■□□□□ 0.04
POLR3B-201ENST00000228347 WRNQ14191 1432 aaPredicted RBP eCLIP15.29■□□□□ 0.04
POLR3B-201ENST00000228347 CHMP7Q8WUX9 453 aaPredicted RBP15.28■□□□□ 0.04
POLR3B-201ENST00000228347 CNGB1Q14028 1251 aaPredicted RBP15.27■□□□□ 0.04
POLR3B-201ENST00000228347 ZNF777Q9ULD5 760 aaPredicted RBP15.27■□□□□ 0.04
POLR3B-201ENST00000228347 MYO15BQ96JP2 1530 aa15.27■□□□□ 0.04
POLR3B-201ENST00000228347 EEA1Q15075 1411 aa15.23■□□□□ 0.03
POLR3B-201ENST00000228347 NPM1P06748 294 aaKnown RBP eCLIP15.22■□□□□ 0.03
POLR3B-201ENST00000228347 SLC4A1APQ9BWU0 796 aaKnown RBP15.2■□□□□ 0.02
POLR3B-201ENST00000228347 MROH2BQ7Z745 1585 aa15.19■□□□□ 0.02
POLR3B-201ENST00000228347 ZNF326Q5BKZ1 582 aaKnown RBP15.18■□□□□ 0.02
POLR3B-201ENST00000228347 CLIP1P30622 1438 aa15.16■□□□□ 0.02
POLR3B-201ENST00000228347 KIF27Q86VH2 1401 aa15.15■□□□□ 0.02
POLR3B-201ENST00000228347 DIEXFQ68CQ4 756 aaKnown RBP15.14■□□□□ 0.01
POLR3B-201ENST00000228347 ERCC6Q03468 1493 aa15.12■□□□□ 0.01
POLR3B-201ENST00000228347 GOLGA3Q08378 1498 aa15.11■□□□□ 0.01
POLR3B-201ENST00000228347 MTUS2Q5JR59 1369 aa15.1■□□□□ 0.01
POLR3B-201ENST00000228347 SMARCA2P51531 1590 aa15.1■□□□□ 0.01
POLR3B-201ENST00000228347 CCDC88BA6NC98 1476 aa15.05■□□□□ -0
POLR3B-201ENST00000228347 CEP162Q5TB80 1403 aa15.03■□□□□ -0
POLR3B-201ENST00000228347 ERICH6Q7L0X2 663 aa15.03■□□□□ -0
POLR3B-201ENST00000228347 CEP164Q9UPV0 1460 aa15.02■□□□□ -0
POLR3B-201ENST00000228347 CHIC2Q9UKJ5 165 aa15.01□□□□□ -0.01
POLR3B-201ENST00000228347 TSPY4P0CV99 314 aa15□□□□□ -0.01
POLR3B-201ENST00000228347 TSPY10P0CW01 314 aa15□□□□□ -0.01
POLR3B-201ENST00000228347 ESF1Q9H501 851 aaKnown RBP15□□□□□ -0.01
POLR3B-201ENST00000228347 TNIKQ9UKE5 1360 aa14.99□□□□□ -0.01
POLR3B-201ENST00000228347 CUX2O14529 1486 aa14.96□□□□□ -0.01
POLR3B-201ENST00000228347 PLEKHD1A6NEE1 506 aa14.96□□□□□ -0.01
POLR3B-201ENST00000228347 ZNF316A6NFI3 1004 aaPredicted RBP14.96□□□□□ -0.01
POLR3B-201ENST00000228347 BCANQ96GW7 911 aa14.96□□□□□ -0.02
POLR3B-201ENST00000228347 PDS5BQ9NTI5 1447 aa14.96□□□□□ -0.02
POLR3B-201ENST00000228347 ANP32CO43423 234 aa14.94□□□□□ -0.02
POLR3B-201ENST00000228347 WIZO95785 1651 aa14.93□□□□□ -0.02
POLR3B-201ENST00000228347 TONSLQ96HA7 1378 aa14.93□□□□□ -0.02
POLR3B-201ENST00000228347 ATAD2BQ9ULI0 1458 aa14.93□□□□□ -0.02
POLR3B-201ENST00000228347 TOP2AP11388 1531 aaKnown RBP14.92□□□□□ -0.02
POLR3B-201ENST00000228347 CARMIL1Q5VZK9 1371 aa14.92□□□□□ -0.02
POLR3B-201ENST00000228347 KCNH8Q96L42 1107 aa14.92□□□□□ -0.02
POLR3B-201ENST00000228347 SOGA1O94964 1423 aa14.92□□□□□ -0.02
POLR3B-201ENST00000228347 CHGAP10645 457 aaKnown RBP14.9□□□□□ -0.02
POLR3B-201ENST00000228347 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.9□□□□□ -0.02
POLR3B-201ENST00000228347 CADPSQ9ULU8 1353 aa14.89□□□□□ -0.03
POLR3B-201ENST00000228347 STAG3Q9UJ98 1225 aa14.87□□□□□ -0.03
POLR3B-201ENST00000228347 ABCC8Q09428 1581 aa14.87□□□□□ -0.03
POLR3B-201ENST00000228347 SMARCA4P51532 1647 aa14.86□□□□□ -0.03
POLR3B-201ENST00000228347 RRP7BPQ9NSQ0 103 aa14.82□□□□□ -0.04
POLR3B-201ENST00000228347 CFDP1Q9UEE9 299 aaPredicted RBP14.82□□□□□ -0.04
POLR3B-201ENST00000228347 TDRD9Q8NDG6 1382 aaKnown RBP14.82□□□□□ -0.04
POLR3B-201ENST00000228347 PLPPR3Q6T4P5 718 aa14.8□□□□□ -0.04
POLR3B-201ENST00000228347 FHAD1B1AJZ9 1412 aa14.79□□□□□ -0.04
POLR3B-201ENST00000228347 EIF4G1Q04637 1599 aaKnown RBP14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms