Protein–RNA interactions for Protein: Q9UQ90

SPG7, Paraplegin, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7Q9UQ90 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
SPG7Q9UQ90 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
SPG7Q9UQ90 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
SPG7Q9UQ90 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC27.87■■■□□ 2.05
SPG7Q9UQ90 RBM17P2-201ENST00000616397 1405 ntBASIC27.87■■■□□ 2.05
SPG7Q9UQ90 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
SPG7Q9UQ90 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
SPG7Q9UQ90 POU5F1P3-201ENST00000428824 1078 ntBASIC27.87■■■□□ 2.05
SPG7Q9UQ90 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC27.87■■■□□ 2.05
SPG7Q9UQ90 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC27.87■■■□□ 2.05
SPG7Q9UQ90 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC27.87■■■□□ 2.05
SPG7Q9UQ90 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC27.87■■■□□ 2.05
SPG7Q9UQ90 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
SPG7Q9UQ90 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
SPG7Q9UQ90 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC27.87■■■□□ 2.05
SPG7Q9UQ90 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
SPG7Q9UQ90 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC27.86■■■□□ 2.05
SPG7Q9UQ90 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
SPG7Q9UQ90 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC27.86■■■□□ 2.05
SPG7Q9UQ90 BX276092.2-201ENST00000417668 665 ntBASIC27.86■■■□□ 2.05
SPG7Q9UQ90 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC27.86■■■□□ 2.05
SPG7Q9UQ90 AL162412.1-201ENST00000567129 965 ntBASIC27.86■■■□□ 2.05
SPG7Q9UQ90 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC27.86■■■□□ 2.05
SPG7Q9UQ90 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
SPG7Q9UQ90 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC27.85■■■□□ 2.05
SPG7Q9UQ90 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC27.85■■■□□ 2.05
SPG7Q9UQ90 FGF8-207ENST00000618991 856 ntTSL 3 BASIC27.85■■■□□ 2.05
SPG7Q9UQ90 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
SPG7Q9UQ90 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC27.85■■■□□ 2.05
SPG7Q9UQ90 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC27.85■■■□□ 2.05
SPG7Q9UQ90 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC27.85■■■□□ 2.05
SPG7Q9UQ90 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
SPG7Q9UQ90 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC27.84■■■□□ 2.05
SPG7Q9UQ90 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
SPG7Q9UQ90 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
SPG7Q9UQ90 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC27.84■■■□□ 2.05
SPG7Q9UQ90 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
SPG7Q9UQ90 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
SPG7Q9UQ90 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC27.84■■■□□ 2.05
SPG7Q9UQ90 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC27.84■■■□□ 2.05
SPG7Q9UQ90 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC27.84■■■□□ 2.05
SPG7Q9UQ90 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC27.84■■■□□ 2.05
SPG7Q9UQ90 AL591742.1-201ENST00000604433 565 ntBASIC27.84■■■□□ 2.05
SPG7Q9UQ90 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC27.84■■■□□ 2.05
SPG7Q9UQ90 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
SPG7Q9UQ90 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
SPG7Q9UQ90 RARG-204ENST00000543726 1779 ntTSL 2 BASIC27.83■■■□□ 2.05
SPG7Q9UQ90 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
SPG7Q9UQ90 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC27.83■■■□□ 2.05
SPG7Q9UQ90 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC27.83■■■□□ 2.05
SPG7Q9UQ90 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC27.83■■■□□ 2.05
SPG7Q9UQ90 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC27.83■■■□□ 2.05
SPG7Q9UQ90 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
SPG7Q9UQ90 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC27.82■■■□□ 2.04
SPG7Q9UQ90 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC27.82■■■□□ 2.04
SPG7Q9UQ90 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
SPG7Q9UQ90 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC27.82■■■□□ 2.04
SPG7Q9UQ90 AC243732.1-201ENST00000612648 864 ntBASIC27.82■■■□□ 2.04
SPG7Q9UQ90 ITM2C-210ENST00000620962 501 ntBASIC27.82■■■□□ 2.04
SPG7Q9UQ90 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
SPG7Q9UQ90 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
SPG7Q9UQ90 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC27.82■■■□□ 2.04
SPG7Q9UQ90 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
SPG7Q9UQ90 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
SPG7Q9UQ90 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC27.81■■■□□ 2.04
SPG7Q9UQ90 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC27.81■■■□□ 2.04
SPG7Q9UQ90 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC27.81■■■□□ 2.04
SPG7Q9UQ90 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
SPG7Q9UQ90 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
SPG7Q9UQ90 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
SPG7Q9UQ90 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC27.8■■■□□ 2.04
SPG7Q9UQ90 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC27.8■■■□□ 2.04
SPG7Q9UQ90 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC27.8■■■□□ 2.04
SPG7Q9UQ90 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC27.8■■■□□ 2.04
SPG7Q9UQ90 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC27.8■■■□□ 2.04
SPG7Q9UQ90 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
SPG7Q9UQ90 AC008687.6-201ENST00000596318 630 ntBASIC27.8■■■□□ 2.04
SPG7Q9UQ90 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC27.8■■■□□ 2.04
SPG7Q9UQ90 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
SPG7Q9UQ90 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC27.8■■■□□ 2.04
SPG7Q9UQ90 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
SPG7Q9UQ90 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC27.8■■■□□ 2.04
SPG7Q9UQ90 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
SPG7Q9UQ90 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC27.8■■■□□ 2.04
SPG7Q9UQ90 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC27.79■■■□□ 2.04
SPG7Q9UQ90 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC27.79■■■□□ 2.04
SPG7Q9UQ90 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC27.79■■■□□ 2.04
SPG7Q9UQ90 AC061975.6-201ENST00000579045 1553 ntBASIC27.79■■■□□ 2.04
SPG7Q9UQ90 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC27.79■■■□□ 2.04
SPG7Q9UQ90 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC27.79■■■□□ 2.04
SPG7Q9UQ90 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
SPG7Q9UQ90 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC27.79■■■□□ 2.04
SPG7Q9UQ90 AC083880.1-201ENST00000608266 535 ntBASIC27.79■■■□□ 2.04
SPG7Q9UQ90 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
SPG7Q9UQ90 MYC-209ENST00000641252 345 ntBASIC27.79■■■□□ 2.04
SPG7Q9UQ90 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
SPG7Q9UQ90 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
SPG7Q9UQ90 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
SPG7Q9UQ90 AC010980.2-201ENST00000587099 1412 ntBASIC27.78■■■□□ 2.04
SPG7Q9UQ90 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms