Protein–RNA interactions for Protein: Q9UMX0

UBQLN1, Ubiquilin-1, humanhuman

Known RBP Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1Q9UMX0 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC22.83■■□□□ 1.25
UBQLN1Q9UMX0 METTL26-203ENST00000397664 604 ntTSL 2 BASIC22.83■■□□□ 1.25
UBQLN1Q9UMX0 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC22.83■■□□□ 1.25
UBQLN1Q9UMX0 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC22.83■■□□□ 1.25
UBQLN1Q9UMX0 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
UBQLN1Q9UMX0 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC22.83■■□□□ 1.25
UBQLN1Q9UMX0 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC22.83■■□□□ 1.24
UBQLN1Q9UMX0 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
UBQLN1Q9UMX0 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC22.82■■□□□ 1.24
UBQLN1Q9UMX0 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
UBQLN1Q9UMX0 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
UBQLN1Q9UMX0 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
UBQLN1Q9UMX0 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC22.82■■□□□ 1.24
UBQLN1Q9UMX0 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
UBQLN1Q9UMX0 RARG-204ENST00000543726 1779 ntTSL 2 BASIC22.82■■□□□ 1.24
UBQLN1Q9UMX0 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC22.82■■□□□ 1.24
UBQLN1Q9UMX0 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC22.82■■□□□ 1.24
UBQLN1Q9UMX0 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC22.82■■□□□ 1.24
UBQLN1Q9UMX0 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC22.82■■□□□ 1.24
UBQLN1Q9UMX0 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC22.82■■□□□ 1.24
UBQLN1Q9UMX0 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
UBQLN1Q9UMX0 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC22.82■■□□□ 1.24
UBQLN1Q9UMX0 CDCA4P2-201ENST00000441182 718 ntBASIC22.82■■□□□ 1.24
UBQLN1Q9UMX0 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC22.82■■□□□ 1.24
UBQLN1Q9UMX0 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
UBQLN1Q9UMX0 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
UBQLN1Q9UMX0 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
UBQLN1Q9UMX0 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC22.82■■□□□ 1.24
UBQLN1Q9UMX0 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
UBQLN1Q9UMX0 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC22.82■■□□□ 1.24
UBQLN1Q9UMX0 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC22.81■■□□□ 1.24
UBQLN1Q9UMX0 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
UBQLN1Q9UMX0 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
UBQLN1Q9UMX0 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
UBQLN1Q9UMX0 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC22.81■■□□□ 1.24
UBQLN1Q9UMX0 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
UBQLN1Q9UMX0 AC010542.4-201ENST00000563151 1910 ntBASIC22.81■■□□□ 1.24
UBQLN1Q9UMX0 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
UBQLN1Q9UMX0 POU5F1P4-201ENST00000413175 1085 ntBASIC22.81■■□□□ 1.24
UBQLN1Q9UMX0 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
UBQLN1Q9UMX0 SLC7A5P1-201ENST00000568957 537 ntBASIC22.81■■□□□ 1.24
UBQLN1Q9UMX0 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC22.81■■□□□ 1.24
UBQLN1Q9UMX0 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
UBQLN1Q9UMX0 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
UBQLN1Q9UMX0 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC22.81■■□□□ 1.24
UBQLN1Q9UMX0 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC22.81■■□□□ 1.24
UBQLN1Q9UMX0 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC22.8■■□□□ 1.24
UBQLN1Q9UMX0 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC22.8■■□□□ 1.24
UBQLN1Q9UMX0 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC22.8■■□□□ 1.24
UBQLN1Q9UMX0 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC22.8■■□□□ 1.24
UBQLN1Q9UMX0 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
UBQLN1Q9UMX0 RAP2CP1-201ENST00000605103 478 ntBASIC22.8■■□□□ 1.24
UBQLN1Q9UMX0 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC22.8■■□□□ 1.24
UBQLN1Q9UMX0 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
UBQLN1Q9UMX0 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
UBQLN1Q9UMX0 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
UBQLN1Q9UMX0 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
UBQLN1Q9UMX0 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
UBQLN1Q9UMX0 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
UBQLN1Q9UMX0 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC22.79■■□□□ 1.24
UBQLN1Q9UMX0 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC22.79■■□□□ 1.24
UBQLN1Q9UMX0 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC22.79■■□□□ 1.24
UBQLN1Q9UMX0 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC22.79■■□□□ 1.24
UBQLN1Q9UMX0 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC22.79■■□□□ 1.24
UBQLN1Q9UMX0 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC22.79■■□□□ 1.24
UBQLN1Q9UMX0 BRI3-207ENST00000539286 699 ntTSL 2 BASIC22.79■■□□□ 1.24
UBQLN1Q9UMX0 SLC7A5P2-201ENST00000553010 536 ntBASIC22.79■■□□□ 1.24
UBQLN1Q9UMX0 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC22.79■■□□□ 1.24
UBQLN1Q9UMX0 MDK-213ENST00000617138 635 ntTSL 2 BASIC22.79■■□□□ 1.24
UBQLN1Q9UMX0 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC22.79■■□□□ 1.24
UBQLN1Q9UMX0 AC120498.10-201ENST00000621827 505 ntBASIC22.79■■□□□ 1.24
UBQLN1Q9UMX0 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
UBQLN1Q9UMX0 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
UBQLN1Q9UMX0 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
UBQLN1Q9UMX0 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC22.79■■□□□ 1.24
UBQLN1Q9UMX0 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC22.78■■□□□ 1.24
UBQLN1Q9UMX0 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
UBQLN1Q9UMX0 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
UBQLN1Q9UMX0 AC026185.1-201ENST00000445748 174 ntBASIC22.78■■□□□ 1.24
UBQLN1Q9UMX0 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
UBQLN1Q9UMX0 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC22.78■■□□□ 1.24
UBQLN1Q9UMX0 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC22.78■■□□□ 1.24
UBQLN1Q9UMX0 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
UBQLN1Q9UMX0 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
UBQLN1Q9UMX0 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC22.77■■□□□ 1.24
UBQLN1Q9UMX0 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
UBQLN1Q9UMX0 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
UBQLN1Q9UMX0 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC22.77■■□□□ 1.24
UBQLN1Q9UMX0 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC22.77■■□□□ 1.24
UBQLN1Q9UMX0 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC22.77■■□□□ 1.24
UBQLN1Q9UMX0 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC22.77■■□□□ 1.24
UBQLN1Q9UMX0 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC22.77■■□□□ 1.24
UBQLN1Q9UMX0 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
UBQLN1Q9UMX0 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
UBQLN1Q9UMX0 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
UBQLN1Q9UMX0 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC22.76■■□□□ 1.23
UBQLN1Q9UMX0 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC22.76■■□□□ 1.23
UBQLN1Q9UMX0 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
UBQLN1Q9UMX0 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC22.76■■□□□ 1.23
UBQLN1Q9UMX0 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC22.76■■□□□ 1.23
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms