Protein–RNA interactions for Protein: Q9H9S0

NANOG, Homeobox protein NANOG, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NANOGQ9H9S0 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC20.1■□□□□ 0.81
NANOGQ9H9S0 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC20.1■□□□□ 0.81
NANOGQ9H9S0 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC20.1■□□□□ 0.81
NANOGQ9H9S0 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NANOGQ9H9S0 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NANOGQ9H9S0 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
NANOGQ9H9S0 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
NANOGQ9H9S0 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NANOGQ9H9S0 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
NANOGQ9H9S0 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC20.1■□□□□ 0.81
NANOGQ9H9S0 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
NANOGQ9H9S0 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC20.1■□□□□ 0.81
NANOGQ9H9S0 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC20.1■□□□□ 0.81
NANOGQ9H9S0 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NANOGQ9H9S0 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
NANOGQ9H9S0 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
NANOGQ9H9S0 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
NANOGQ9H9S0 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
NANOGQ9H9S0 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
NANOGQ9H9S0 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
NANOGQ9H9S0 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC20.09■□□□□ 0.81
NANOGQ9H9S0 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
NANOGQ9H9S0 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
NANOGQ9H9S0 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
NANOGQ9H9S0 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
NANOGQ9H9S0 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.08■□□□□ 0.81
NANOGQ9H9S0 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
NANOGQ9H9S0 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
NANOGQ9H9S0 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
NANOGQ9H9S0 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
NANOGQ9H9S0 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
NANOGQ9H9S0 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
NANOGQ9H9S0 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
NANOGQ9H9S0 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.8
NANOGQ9H9S0 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
NANOGQ9H9S0 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.08■□□□□ 0.8
NANOGQ9H9S0 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
NANOGQ9H9S0 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NANOGQ9H9S0 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
NANOGQ9H9S0 GATM-206ENST00000558336 1522 ntTSL 2 BASIC20.07■□□□□ 0.8
NANOGQ9H9S0 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
NANOGQ9H9S0 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.07■□□□□ 0.8
NANOGQ9H9S0 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.07■□□□□ 0.8
NANOGQ9H9S0 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NANOGQ9H9S0 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
NANOGQ9H9S0 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
NANOGQ9H9S0 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
NANOGQ9H9S0 AL034346.1-201ENST00000568244 1277 ntBASIC20.07■□□□□ 0.8
NANOGQ9H9S0 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NANOGQ9H9S0 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
NANOGQ9H9S0 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
NANOGQ9H9S0 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
NANOGQ9H9S0 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
NANOGQ9H9S0 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NANOGQ9H9S0 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NANOGQ9H9S0 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
NANOGQ9H9S0 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NANOGQ9H9S0 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
NANOGQ9H9S0 AC010525.1-201ENST00000585559 441 ntBASIC20.06■□□□□ 0.8
NANOGQ9H9S0 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.06■□□□□ 0.8
NANOGQ9H9S0 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
NANOGQ9H9S0 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NANOGQ9H9S0 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
NANOGQ9H9S0 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
NANOGQ9H9S0 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NANOGQ9H9S0 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
NANOGQ9H9S0 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
NANOGQ9H9S0 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NANOGQ9H9S0 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.06■□□□□ 0.8
NANOGQ9H9S0 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
NANOGQ9H9S0 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.06■□□□□ 0.8
NANOGQ9H9S0 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NANOGQ9H9S0 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
NANOGQ9H9S0 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NANOGQ9H9S0 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
NANOGQ9H9S0 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NANOGQ9H9S0 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.05■□□□□ 0.8
NANOGQ9H9S0 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.05■□□□□ 0.8
NANOGQ9H9S0 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
NANOGQ9H9S0 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
NANOGQ9H9S0 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
NANOGQ9H9S0 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC20.05■□□□□ 0.8
NANOGQ9H9S0 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
NANOGQ9H9S0 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
NANOGQ9H9S0 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NANOGQ9H9S0 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
NANOGQ9H9S0 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NANOGQ9H9S0 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC20.05■□□□□ 0.8
NANOGQ9H9S0 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
NANOGQ9H9S0 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
NANOGQ9H9S0 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NANOGQ9H9S0 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NANOGQ9H9S0 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NANOGQ9H9S0 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.05■□□□□ 0.8
NANOGQ9H9S0 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NANOGQ9H9S0 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
NANOGQ9H9S0 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NANOGQ9H9S0 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NANOGQ9H9S0 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NANOGQ9H9S0 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms