Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
POLR2J3Q9H1A7 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.56■□□□□ 0.72
POLR2J3Q9H1A7 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
POLR2J3Q9H1A7 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
POLR2J3Q9H1A7 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
POLR2J3Q9H1A7 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.55■□□□□ 0.72
POLR2J3Q9H1A7 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.55■□□□□ 0.72
POLR2J3Q9H1A7 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC19.55■□□□□ 0.72
POLR2J3Q9H1A7 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
POLR2J3Q9H1A7 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
POLR2J3Q9H1A7 AC073130.3-201ENST00000624389 2278 ntBASIC19.55■□□□□ 0.72
POLR2J3Q9H1A7 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
POLR2J3Q9H1A7 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
POLR2J3Q9H1A7 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC19.54■□□□□ 0.72
POLR2J3Q9H1A7 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC19.54■□□□□ 0.72
POLR2J3Q9H1A7 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
POLR2J3Q9H1A7 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
POLR2J3Q9H1A7 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.54■□□□□ 0.72
POLR2J3Q9H1A7 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
POLR2J3Q9H1A7 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
POLR2J3Q9H1A7 SNX3-202ENST00000349379 890 ntTSL 2 BASIC19.54■□□□□ 0.72
POLR2J3Q9H1A7 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
POLR2J3Q9H1A7 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
POLR2J3Q9H1A7 SLC47A1P1-202ENST00000449666 945 ntBASIC19.54■□□□□ 0.72
POLR2J3Q9H1A7 TRIR-202ENST00000588213 841 ntTSL 3 BASIC19.54■□□□□ 0.72
POLR2J3Q9H1A7 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.54■□□□□ 0.72
POLR2J3Q9H1A7 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
POLR2J3Q9H1A7 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
POLR2J3Q9H1A7 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
POLR2J3Q9H1A7 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
POLR2J3Q9H1A7 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
POLR2J3Q9H1A7 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
POLR2J3Q9H1A7 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
POLR2J3Q9H1A7 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC19.54■□□□□ 0.72
POLR2J3Q9H1A7 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
POLR2J3Q9H1A7 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
POLR2J3Q9H1A7 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.53■□□□□ 0.72
POLR2J3Q9H1A7 AP004607.7-201ENST00000527152 1677 ntBASIC19.53■□□□□ 0.72
POLR2J3Q9H1A7 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.53■□□□□ 0.72
POLR2J3Q9H1A7 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
POLR2J3Q9H1A7 AC131281.2-201ENST00000520478 145 ntBASIC19.53■□□□□ 0.72
POLR2J3Q9H1A7 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC19.53■□□□□ 0.72
POLR2J3Q9H1A7 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
POLR2J3Q9H1A7 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
POLR2J3Q9H1A7 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
POLR2J3Q9H1A7 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.53■□□□□ 0.72
POLR2J3Q9H1A7 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.53■□□□□ 0.72
POLR2J3Q9H1A7 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
POLR2J3Q9H1A7 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
POLR2J3Q9H1A7 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
POLR2J3Q9H1A7 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
POLR2J3Q9H1A7 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
POLR2J3Q9H1A7 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
POLR2J3Q9H1A7 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC19.52■□□□□ 0.72
POLR2J3Q9H1A7 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
POLR2J3Q9H1A7 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC19.52■□□□□ 0.72
POLR2J3Q9H1A7 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC19.52■□□□□ 0.72
POLR2J3Q9H1A7 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
POLR2J3Q9H1A7 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
POLR2J3Q9H1A7 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
POLR2J3Q9H1A7 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.52■□□□□ 0.71
POLR2J3Q9H1A7 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
POLR2J3Q9H1A7 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
POLR2J3Q9H1A7 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
POLR2J3Q9H1A7 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
POLR2J3Q9H1A7 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
POLR2J3Q9H1A7 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.51■□□□□ 0.71
POLR2J3Q9H1A7 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.51■□□□□ 0.71
POLR2J3Q9H1A7 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
POLR2J3Q9H1A7 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
POLR2J3Q9H1A7 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
POLR2J3Q9H1A7 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC19.51■□□□□ 0.71
POLR2J3Q9H1A7 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
POLR2J3Q9H1A7 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.51■□□□□ 0.71
POLR2J3Q9H1A7 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
POLR2J3Q9H1A7 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC19.5■□□□□ 0.71
POLR2J3Q9H1A7 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
POLR2J3Q9H1A7 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC19.5■□□□□ 0.71
POLR2J3Q9H1A7 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
POLR2J3Q9H1A7 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC19.5■□□□□ 0.71
POLR2J3Q9H1A7 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC19.5■□□□□ 0.71
POLR2J3Q9H1A7 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC19.5■□□□□ 0.71
POLR2J3Q9H1A7 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
POLR2J3Q9H1A7 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
POLR2J3Q9H1A7 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
POLR2J3Q9H1A7 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
POLR2J3Q9H1A7 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
POLR2J3Q9H1A7 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
POLR2J3Q9H1A7 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
POLR2J3Q9H1A7 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
POLR2J3Q9H1A7 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.49■□□□□ 0.71
POLR2J3Q9H1A7 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
POLR2J3Q9H1A7 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.49■□□□□ 0.71
POLR2J3Q9H1A7 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC19.49■□□□□ 0.71
POLR2J3Q9H1A7 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
POLR2J3Q9H1A7 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC19.49■□□□□ 0.71
POLR2J3Q9H1A7 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
POLR2J3Q9H1A7 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
POLR2J3Q9H1A7 AL157384.1-201ENST00000445995 2473 ntBASIC19.48■□□□□ 0.71
POLR2J3Q9H1A7 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms