Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LITAFQ99732 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
LITAFQ99732 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LITAFQ99732 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
LITAFQ99732 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
LITAFQ99732 PLK5-205ENST00000642079 1969 ntBASIC14.15□□□□□ -0.14
LITAFQ99732 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
LITAFQ99732 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC14.15□□□□□ -0.14
LITAFQ99732 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
LITAFQ99732 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC14.15□□□□□ -0.14
LITAFQ99732 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
LITAFQ99732 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
LITAFQ99732 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
LITAFQ99732 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
LITAFQ99732 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
LITAFQ99732 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
LITAFQ99732 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LITAFQ99732 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LITAFQ99732 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC14.15□□□□□ -0.14
LITAFQ99732 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LITAFQ99732 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
LITAFQ99732 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC14.14□□□□□ -0.15
LITAFQ99732 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LITAFQ99732 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LITAFQ99732 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LITAFQ99732 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
LITAFQ99732 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC14.14□□□□□ -0.15
LITAFQ99732 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LITAFQ99732 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
LITAFQ99732 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LITAFQ99732 MIR4281-201ENST00000580852 62 ntBASIC14.14□□□□□ -0.15
LITAFQ99732 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LITAFQ99732 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
LITAFQ99732 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
LITAFQ99732 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
LITAFQ99732 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LITAFQ99732 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LITAFQ99732 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
LITAFQ99732 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LITAFQ99732 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC14.14□□□□□ -0.15
LITAFQ99732 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LITAFQ99732 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
LITAFQ99732 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC14.14□□□□□ -0.15
LITAFQ99732 USP39-204ENST00000409766 2033 ntTSL 2 BASIC14.14□□□□□ -0.15
LITAFQ99732 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LITAFQ99732 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC14.13□□□□□ -0.15
LITAFQ99732 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LITAFQ99732 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC14.13□□□□□ -0.15
LITAFQ99732 AC112907.3-201ENST00000577781 2400 ntBASIC14.13□□□□□ -0.15
LITAFQ99732 AC098818.2-201ENST00000564925 2320 ntBASIC14.13□□□□□ -0.15
LITAFQ99732 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC14.13□□□□□ -0.15
LITAFQ99732 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LITAFQ99732 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LITAFQ99732 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LITAFQ99732 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LITAFQ99732 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
LITAFQ99732 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC14.13□□□□□ -0.15
LITAFQ99732 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC14.13□□□□□ -0.15
LITAFQ99732 AC020907.5-201ENST00000624372 1936 ntBASIC14.13□□□□□ -0.15
LITAFQ99732 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
LITAFQ99732 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LITAFQ99732 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC14.13□□□□□ -0.15
LITAFQ99732 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LITAFQ99732 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LITAFQ99732 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LITAFQ99732 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
LITAFQ99732 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LITAFQ99732 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
LITAFQ99732 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC14.12□□□□□ -0.15
LITAFQ99732 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LITAFQ99732 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC14.12□□□□□ -0.15
LITAFQ99732 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LITAFQ99732 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
LITAFQ99732 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LITAFQ99732 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LITAFQ99732 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LITAFQ99732 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LITAFQ99732 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LITAFQ99732 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC14.12□□□□□ -0.15
LITAFQ99732 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC14.12□□□□□ -0.15
LITAFQ99732 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LITAFQ99732 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
LITAFQ99732 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC14.12□□□□□ -0.15
LITAFQ99732 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC14.12□□□□□ -0.15
LITAFQ99732 AC019171.1-201ENST00000601251 1056 ntBASIC14.12□□□□□ -0.15
LITAFQ99732 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LITAFQ99732 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LITAFQ99732 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LITAFQ99732 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC14.12□□□□□ -0.15
LITAFQ99732 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LITAFQ99732 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
LITAFQ99732 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC14.12□□□□□ -0.15
LITAFQ99732 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LITAFQ99732 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
LITAFQ99732 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LITAFQ99732 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LITAFQ99732 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LITAFQ99732 AL162377.1-201ENST00000618844 1793 ntBASIC14.11□□□□□ -0.15
LITAFQ99732 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
LITAFQ99732 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms