Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC18.8■□□□□ 0.6
APH1AQ96BI3 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
APH1AQ96BI3 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
APH1AQ96BI3 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
APH1AQ96BI3 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
APH1AQ96BI3 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
APH1AQ96BI3 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
APH1AQ96BI3 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
APH1AQ96BI3 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
APH1AQ96BI3 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
APH1AQ96BI3 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
APH1AQ96BI3 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC18.79■□□□□ 0.6
APH1AQ96BI3 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC18.79■□□□□ 0.6
APH1AQ96BI3 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC18.79■□□□□ 0.6
APH1AQ96BI3 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC18.79■□□□□ 0.6
APH1AQ96BI3 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
APH1AQ96BI3 C11orf96-202ENST00000528572 1834 ntBASIC18.79■□□□□ 0.6
APH1AQ96BI3 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
APH1AQ96BI3 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
APH1AQ96BI3 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
APH1AQ96BI3 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
APH1AQ96BI3 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
APH1AQ96BI3 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC18.78■□□□□ 0.6
APH1AQ96BI3 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
APH1AQ96BI3 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
APH1AQ96BI3 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
APH1AQ96BI3 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
APH1AQ96BI3 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
APH1AQ96BI3 SERP1-208ENST00000491660 830 ntTSL 2 BASIC18.78■□□□□ 0.6
APH1AQ96BI3 KRT18P61-201ENST00000585825 1298 ntBASIC18.78■□□□□ 0.6
APH1AQ96BI3 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC18.78■□□□□ 0.6
APH1AQ96BI3 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
APH1AQ96BI3 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
APH1AQ96BI3 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC18.78■□□□□ 0.6
APH1AQ96BI3 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
APH1AQ96BI3 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
APH1AQ96BI3 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
APH1AQ96BI3 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
APH1AQ96BI3 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
APH1AQ96BI3 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC18.78■□□□□ 0.6
APH1AQ96BI3 AC026471.6-201ENST00000622954 1905 ntBASIC18.78■□□□□ 0.6
APH1AQ96BI3 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
APH1AQ96BI3 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
APH1AQ96BI3 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
APH1AQ96BI3 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
APH1AQ96BI3 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC18.77■□□□□ 0.6
APH1AQ96BI3 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
APH1AQ96BI3 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
APH1AQ96BI3 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
APH1AQ96BI3 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
APH1AQ96BI3 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
APH1AQ96BI3 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC18.77■□□□□ 0.6
APH1AQ96BI3 EEF1DP3-203ENST00000566025 782 ntBASIC18.77■□□□□ 0.6
APH1AQ96BI3 AC053503.5-201ENST00000601508 636 ntBASIC18.77■□□□□ 0.6
APH1AQ96BI3 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
APH1AQ96BI3 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC18.77■□□□□ 0.6
APH1AQ96BI3 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
APH1AQ96BI3 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
APH1AQ96BI3 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
APH1AQ96BI3 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
APH1AQ96BI3 AC022517.1-201ENST00000592429 346 ntBASIC18.76■□□□□ 0.59
APH1AQ96BI3 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
APH1AQ96BI3 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
APH1AQ96BI3 AC010542.4-201ENST00000563151 1910 ntBASIC18.76■□□□□ 0.59
APH1AQ96BI3 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
APH1AQ96BI3 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
APH1AQ96BI3 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC18.75■□□□□ 0.59
APH1AQ96BI3 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
APH1AQ96BI3 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC18.75■□□□□ 0.59
APH1AQ96BI3 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
APH1AQ96BI3 AC137761.2-201ENST00000561729 223 ntBASIC18.75■□□□□ 0.59
APH1AQ96BI3 AC145350.3-201ENST00000569033 163 ntBASIC18.75■□□□□ 0.59
APH1AQ96BI3 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC18.75■□□□□ 0.59
APH1AQ96BI3 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC18.75■□□□□ 0.59
APH1AQ96BI3 AC092666.2-201ENST00000613287 246 ntBASIC18.75■□□□□ 0.59
APH1AQ96BI3 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
APH1AQ96BI3 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
APH1AQ96BI3 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
APH1AQ96BI3 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
APH1AQ96BI3 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
APH1AQ96BI3 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
APH1AQ96BI3 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
APH1AQ96BI3 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
APH1AQ96BI3 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
APH1AQ96BI3 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
APH1AQ96BI3 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC18.74■□□□□ 0.59
APH1AQ96BI3 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
APH1AQ96BI3 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC18.74■□□□□ 0.59
APH1AQ96BI3 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC18.74■□□□□ 0.59
APH1AQ96BI3 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC18.74■□□□□ 0.59
APH1AQ96BI3 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC18.74■□□□□ 0.59
APH1AQ96BI3 EP400NL-214ENST00000641289 2402 ntBASIC18.74■□□□□ 0.59
APH1AQ96BI3 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
APH1AQ96BI3 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
APH1AQ96BI3 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
APH1AQ96BI3 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
APH1AQ96BI3 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
APH1AQ96BI3 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
APH1AQ96BI3 AC016769.1-201ENST00000409132 1010 ntBASIC18.73■□□□□ 0.59
APH1AQ96BI3 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms