Protein–RNA interactions for Protein: Q8TBE1

CNIH3, Protein cornichon homolog 3, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH3Q8TBE1 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CNIH3Q8TBE1 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CNIH3Q8TBE1 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.35■□□□□ 0.69
CNIH3Q8TBE1 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
CNIH3Q8TBE1 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CNIH3Q8TBE1 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.34■□□□□ 0.69
CNIH3Q8TBE1 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CNIH3Q8TBE1 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CNIH3Q8TBE1 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.34■□□□□ 0.69
CNIH3Q8TBE1 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CNIH3Q8TBE1 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CNIH3Q8TBE1 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
CNIH3Q8TBE1 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
CNIH3Q8TBE1 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC19.34■□□□□ 0.69
CNIH3Q8TBE1 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CNIH3Q8TBE1 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
CNIH3Q8TBE1 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CNIH3Q8TBE1 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CNIH3Q8TBE1 OR7E47P-201ENST00000546390 1422 ntBASIC19.34■□□□□ 0.69
CNIH3Q8TBE1 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CNIH3Q8TBE1 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CNIH3Q8TBE1 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.33■□□□□ 0.69
CNIH3Q8TBE1 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CNIH3Q8TBE1 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CNIH3Q8TBE1 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC19.33■□□□□ 0.69
CNIH3Q8TBE1 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.33■□□□□ 0.69
CNIH3Q8TBE1 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
CNIH3Q8TBE1 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
CNIH3Q8TBE1 AC004987.1-201ENST00000428627 508 ntBASIC19.33■□□□□ 0.68
CNIH3Q8TBE1 ATP5G2P3-201ENST00000429083 425 ntBASIC19.33■□□□□ 0.68
CNIH3Q8TBE1 EI24-211ENST00000534546 1544 ntTSL 2 BASIC19.33■□□□□ 0.68
CNIH3Q8TBE1 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
CNIH3Q8TBE1 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CNIH3Q8TBE1 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CNIH3Q8TBE1 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CNIH3Q8TBE1 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CNIH3Q8TBE1 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CNIH3Q8TBE1 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.32■□□□□ 0.68
CNIH3Q8TBE1 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CNIH3Q8TBE1 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.32■□□□□ 0.68
CNIH3Q8TBE1 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.32■□□□□ 0.68
CNIH3Q8TBE1 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CNIH3Q8TBE1 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CNIH3Q8TBE1 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CNIH3Q8TBE1 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.32■□□□□ 0.68
CNIH3Q8TBE1 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CNIH3Q8TBE1 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CNIH3Q8TBE1 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CNIH3Q8TBE1 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CNIH3Q8TBE1 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
CNIH3Q8TBE1 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CNIH3Q8TBE1 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CNIH3Q8TBE1 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
CNIH3Q8TBE1 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.32■□□□□ 0.68
CNIH3Q8TBE1 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.32■□□□□ 0.68
CNIH3Q8TBE1 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CNIH3Q8TBE1 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
CNIH3Q8TBE1 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CNIH3Q8TBE1 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CNIH3Q8TBE1 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CNIH3Q8TBE1 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
CNIH3Q8TBE1 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CNIH3Q8TBE1 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CNIH3Q8TBE1 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CNIH3Q8TBE1 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CNIH3Q8TBE1 CLTA-206ENST00000466396 695 ntTSL 2 BASIC19.31■□□□□ 0.68
CNIH3Q8TBE1 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
CNIH3Q8TBE1 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CNIH3Q8TBE1 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
CNIH3Q8TBE1 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CNIH3Q8TBE1 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
CNIH3Q8TBE1 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CNIH3Q8TBE1 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.31■□□□□ 0.68
CNIH3Q8TBE1 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.31■□□□□ 0.68
CNIH3Q8TBE1 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CNIH3Q8TBE1 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CNIH3Q8TBE1 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC19.3■□□□□ 0.68
CNIH3Q8TBE1 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CNIH3Q8TBE1 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
CNIH3Q8TBE1 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CNIH3Q8TBE1 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CNIH3Q8TBE1 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
CNIH3Q8TBE1 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.3■□□□□ 0.68
CNIH3Q8TBE1 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.3■□□□□ 0.68
CNIH3Q8TBE1 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.3■□□□□ 0.68
CNIH3Q8TBE1 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CNIH3Q8TBE1 USP45-205ENST00000472914 1617 ntTSL 5 BASIC19.3■□□□□ 0.68
CNIH3Q8TBE1 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.3■□□□□ 0.68
CNIH3Q8TBE1 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
CNIH3Q8TBE1 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CNIH3Q8TBE1 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CNIH3Q8TBE1 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CNIH3Q8TBE1 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC19.3■□□□□ 0.68
CNIH3Q8TBE1 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CNIH3Q8TBE1 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CNIH3Q8TBE1 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CNIH3Q8TBE1 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.3■□□□□ 0.68
CNIH3Q8TBE1 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
CNIH3Q8TBE1 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CNIH3Q8TBE1 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms