Protein–RNA interactions for Protein: Q8N6N2

TTC9B, Tetratricopeptide repeat protein 9B, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9BQ8N6N2 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC22.37■■□□□ 1.17
TTC9BQ8N6N2 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
TTC9BQ8N6N2 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
TTC9BQ8N6N2 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC22.37■■□□□ 1.17
TTC9BQ8N6N2 GPX1P1-201ENST00000388829 606 ntBASIC22.37■■□□□ 1.17
TTC9BQ8N6N2 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
TTC9BQ8N6N2 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC22.37■■□□□ 1.17
TTC9BQ8N6N2 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC22.37■■□□□ 1.17
TTC9BQ8N6N2 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
TTC9BQ8N6N2 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC22.37■■□□□ 1.17
TTC9BQ8N6N2 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
TTC9BQ8N6N2 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
TTC9BQ8N6N2 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
TTC9BQ8N6N2 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
TTC9BQ8N6N2 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
TTC9BQ8N6N2 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC22.37■■□□□ 1.17
TTC9BQ8N6N2 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
TTC9BQ8N6N2 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
TTC9BQ8N6N2 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
TTC9BQ8N6N2 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
TTC9BQ8N6N2 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
TTC9BQ8N6N2 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC22.36■■□□□ 1.17
TTC9BQ8N6N2 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
TTC9BQ8N6N2 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
TTC9BQ8N6N2 PARP1-210ENST00000629232 477 ntTSL 5 BASIC22.36■■□□□ 1.17
TTC9BQ8N6N2 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC22.36■■□□□ 1.17
TTC9BQ8N6N2 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
TTC9BQ8N6N2 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
TTC9BQ8N6N2 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC22.35■■□□□ 1.17
TTC9BQ8N6N2 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC22.35■■□□□ 1.17
TTC9BQ8N6N2 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC22.35■■□□□ 1.17
TTC9BQ8N6N2 METTL15-202ENST00000403099 795 ntTSL 5 BASIC22.35■■□□□ 1.17
TTC9BQ8N6N2 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC22.35■■□□□ 1.17
TTC9BQ8N6N2 GUSBP6-202ENST00000438529 1198 ntBASIC22.35■■□□□ 1.17
TTC9BQ8N6N2 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC22.35■■□□□ 1.17
TTC9BQ8N6N2 AC083906.2-201ENST00000511578 360 ntBASIC22.35■■□□□ 1.17
TTC9BQ8N6N2 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
TTC9BQ8N6N2 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
TTC9BQ8N6N2 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
TTC9BQ8N6N2 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC22.34■■□□□ 1.17
TTC9BQ8N6N2 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
TTC9BQ8N6N2 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
TTC9BQ8N6N2 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
TTC9BQ8N6N2 APTR-203ENST00000430801 583 ntTSL 5 BASIC22.34■■□□□ 1.17
TTC9BQ8N6N2 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
TTC9BQ8N6N2 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC22.34■■□□□ 1.17
TTC9BQ8N6N2 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC22.34■■□□□ 1.17
TTC9BQ8N6N2 AL121832.2-201ENST00000610979 668 ntBASIC22.34■■□□□ 1.17
TTC9BQ8N6N2 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC22.34■■□□□ 1.17
TTC9BQ8N6N2 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC22.34■■□□□ 1.17
TTC9BQ8N6N2 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
TTC9BQ8N6N2 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
TTC9BQ8N6N2 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
TTC9BQ8N6N2 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC22.33■■□□□ 1.17
TTC9BQ8N6N2 RARG-204ENST00000543726 1779 ntTSL 2 BASIC22.33■■□□□ 1.17
TTC9BQ8N6N2 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC22.33■■□□□ 1.17
TTC9BQ8N6N2 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
TTC9BQ8N6N2 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
TTC9BQ8N6N2 BMP1-204ENST00000397814 836 ntTSL 4 BASIC22.33■■□□□ 1.17
TTC9BQ8N6N2 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC22.33■■□□□ 1.17
TTC9BQ8N6N2 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
TTC9BQ8N6N2 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
TTC9BQ8N6N2 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
TTC9BQ8N6N2 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC22.33■■□□□ 1.16
TTC9BQ8N6N2 AC010542.4-201ENST00000563151 1910 ntBASIC22.33■■□□□ 1.16
TTC9BQ8N6N2 AC061975.6-201ENST00000579045 1553 ntBASIC22.33■■□□□ 1.16
TTC9BQ8N6N2 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC22.32■■□□□ 1.16
TTC9BQ8N6N2 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
TTC9BQ8N6N2 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
TTC9BQ8N6N2 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC22.32■■□□□ 1.16
TTC9BQ8N6N2 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC22.32■■□□□ 1.16
TTC9BQ8N6N2 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC22.32■■□□□ 1.16
TTC9BQ8N6N2 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC22.32■■□□□ 1.16
TTC9BQ8N6N2 TSPY6P-201ENST00000448518 926 ntBASIC22.32■■□□□ 1.16
TTC9BQ8N6N2 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC22.32■■□□□ 1.16
TTC9BQ8N6N2 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
TTC9BQ8N6N2 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC22.32■■□□□ 1.16
TTC9BQ8N6N2 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC22.32■■□□□ 1.16
TTC9BQ8N6N2 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC22.32■■□□□ 1.16
TTC9BQ8N6N2 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
TTC9BQ8N6N2 FAM99A-202ENST00000538190 1989 ntBASIC22.32■■□□□ 1.16
TTC9BQ8N6N2 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
TTC9BQ8N6N2 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
TTC9BQ8N6N2 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
TTC9BQ8N6N2 TERF1P5-201ENST00000477545 1207 ntBASIC22.31■■□□□ 1.16
TTC9BQ8N6N2 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC22.31■■□□□ 1.16
TTC9BQ8N6N2 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC22.31■■□□□ 1.16
TTC9BQ8N6N2 SLC7A5P1-201ENST00000568957 537 ntBASIC22.31■■□□□ 1.16
TTC9BQ8N6N2 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC22.31■■□□□ 1.16
TTC9BQ8N6N2 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC22.31■■□□□ 1.16
TTC9BQ8N6N2 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC22.3■■□□□ 1.16
TTC9BQ8N6N2 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
TTC9BQ8N6N2 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC22.3■■□□□ 1.16
TTC9BQ8N6N2 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
TTC9BQ8N6N2 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC22.3■■□□□ 1.16
TTC9BQ8N6N2 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC22.3■■□□□ 1.16
TTC9BQ8N6N2 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC22.3■■□□□ 1.16
TTC9BQ8N6N2 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
TTC9BQ8N6N2 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
TTC9BQ8N6N2 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC22.29■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms